Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0665 ATGTGTACTTGTAGCTTAAGCAAAAATCTTACATCTCCCCTGCTCATACACAGGTCAAAAGCCAAAATTCTGGTGGAGCAACGTGGGATGCTTGTTTTGTTTGGTTTGAACTTTGTTACATGCATGAGGGGAAACAAAAACGCAACCAGAAGGGATCGTACTGATAGAACTATCGCTAAAGAACAAGATCAGGAACATGAAGTAGAAGAAGATGATCCTGGTGATGATGGGTATGGTGGAGGAAATCATCACCGGAAAAAACCTGAGCCTATCATGGACAACATTCCAACTTCTTCATCCGCAGGCGACAGAAAATTAATAGAGAGGAACAGAAGAAGCCAGATGAGAACTCTTTGCTCCCAGCTCAGCTCACTCGTCCCTCGTCAATCCTCAAAGGGGGTGATTTCGCTTTCAGATCAGCTGGGTGAAGCCGCCAACTACATAAAGAAGCTTCAGATAAAGTTGGAGAAGATGAAGGAGAAGAAGCTCTGCCTCATGGGAATCAACAACAACGAGCCTAACATCACTGAGAGTCTAGGTTATAATGATAATAATAAGAATAATAGAGAAATGATTATGGGTTCGAAATCGCCCAAAGTTGAGATTCACCAAATGGGTTCAACATTAGAGGTTTCTGTGATCACTGGGTTGGATTGCCAATTCATTTTCAACGAGTTCATTCGCATCCTTCATGAAGAACAAGCCGATGTTGTAAATGCGACTTATTCAGTTGTTCAAGATACTGTTTTACACACCATTCATTGTCAGATAGGAGATTGTGGTAATAGAGCTGGGAGGATATCGGAGAGATTAGAGAGGTTTGTGTATGGTTCTGGTGCATTTTGA 846 0.4196 MCTCSLSKNLTSPLLIHRSKAKILVEQRGMLVLFGLNFVTCMRGNKNATRRDRTDRTIAKEQDQEHEVEEDDPGDDGYGGGNHHRKKPEPIMDNIPTSSSAGDRKLIERNRRSQMRTLCSQLSSLVPRQSSKGVISLSDQLGEAANYIKKLQIKLEKMKEKKLCLMGINNNEPNITESLGYNDNNKNNREMIMGSKSPKVEIHQMGSTLEVSVITGLDCQFIFNEFIRILHEEQADVVNATYSVVQDTVLHTIHCQIGDCGNRAGRISERLERFVYGSGAF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0665 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 105 165 IPR036638 GO:0046983
Lele14g0665 281 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 84 276 IPR015660 -
Lele14g0665 281 Coils Coil 141 161 - -
Lele14g0665 281 MobiDBLite consensus disorder prediction 76 91 - -
Lele14g0665 281 SMART finulus 105 157 IPR011598 GO:0046983
Lele14g0665 281 MobiDBLite consensus disorder prediction 48 104 - -
Lele14g0665 281 Pfam Helix-loop-helix DNA-binding domain 105 152 IPR011598 GO:0046983
Lele14g0665 281 Gene3D - 101 177 IPR036638 GO:0046983
Lele14g0665 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 99 151 IPR011598 GO:0046983
Lele14g0665 281 MobiDBLite consensus disorder prediction 48 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0665 Lele-ChrLele14 17966514 17974530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0665 96 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.957 3.65e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele14g0665 HLH 1.7e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0665 14 17966514 17974530 Lele15g1706 15 10180486 10181398 hybridization
Lele14g0665 14 17966514 17974530 Lele16g1742 16 10162318 10163370 hybridization