Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0650 ATGGCTGAAAGATTAACGGAGCTGAAGAAGCTCAACAACAGAGCTGCAGCTGGTGGTGGCCAATCTCTAAGGGGACGGTGCGTGGCGCCATTTCTGTTGAAGACGTATGAGTTGGTGGAAGAAGGCAGAGATGAAGAAGAAGAAAGGAAAAGATCAGTAGTGACATGGAACGAGGAAGGAGATGGTTTTATAGTGTGGCGTCCTGCAGAATTCTCAGAGCTCATATTGCCCAGATATTTCAAGCACAACAACTTTTCCAGCTTCATCCGCCAATTGAACACCTACGGATTTAAGAAAGTGTCGTCAAAGAGATGGGAATTCAAGCAGGAGAAATTTCAGAGAGGTTGCAAGAACATGTTGGCGGAGATAACGAGGAAGAAGTGCGAGGCAAGTGTGTTCCCTTCATACTTGAAGTCTTGTTCTGAAGAAAATGCAGCCACAAGCTGTGCAGGAGATCAAGATCATGAATTACTGGTACAGCAAAACCAAGACCTCAAGAAGCAGAACCAGCACCTTCAATCCCAAATTGCTAAGTTCAAACAATTACAGACCAGGTTGTTGCACTGCGTCTCTCAATCCATGGGCACCCCCCAAAATTAA 600 0.455 MAERLTELKKLNNRAAAGGGQSLRGRCVAPFLLKTYELVEEGRDEEEERKRSVVTWNEEGDGFIVWRPAEFSELILPRYFKHNNFSSFIRQLNTYGFKKVSSKRWEFKQEKFQRGCKNMLAEITRKKCEASVFPSYLKSCSEENAATSCAGDQDHELLVQQNQDLKKQNQHLQSQIAKFKQLQTRLLHCVSQSMGTPQN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0650 199 Pfam HSF-type DNA-binding 31 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0650 199 SMART hsfneu3 27 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0650 199 FunFam Heat stress transcription factor A-6b 24 127 - -
Lele14g0650 199 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 190 IPR027725 -
Lele14g0650 199 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0650 199 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0650 199 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele14g0650 199 Coils Coil 155 182 - -
Lele14g0650 199 SUPERFAMILY "Winged helix" DNA-binding domain 28 126 IPR036390 -
Lele14g0650 199 Gene3D - 24 127 IPR036388 -
Lele14g0650 199 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0650 Lele-ChrLele14 17852718 17856196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0650 29 187 HSF AT4G36990 39.011 4.21e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele14g0650 HSF_DNA-bind 2.9e-29 CL0123