Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0640 ATGGCGACTCTAGCTCCGAACAACTTGTTCTCTGCATTCTCATATCCTTCTCCTTCTTCTTTACCTTCAACTTCAAAGAAACACCTCTCCATTCCCTTTTTTACAATCTCGAAGAAGCCTATTCATTCACGTGCTATTCGGATCTCCAGCTCCATCTCCAATCCAAGCGGACCAAGCCCAAAACCAGCACAAGCATCTTCCGCTGCTGTCACCACCACCAGCACCGACTCGGAAGCTTTCGTTTCCCGATTTACCCCTGATGAGCCCAGGAAAGGCGCTGATATCCTCGTTGAAGCTCTTGAGCGCCAAGGCGTTACCGATGTATTCGCCTACCCCGGCGGTGCTTCAGTGGAGATCCATCAAGCGCTCACGCGCTCCAATATCATCCGTAACGTTCTTCCGCGCCATGAGCAAGGCGGTGTTTTCGCTGCCGAGGGATACGCGCGCTCATCCGGCCTTCCTGGCGTCTGCATCGCCACTTCGGGTCCCGGCGCCACCAATCTGGTCAGTGGTCTTGCCGATGCGCTGCTTGATAGCGTACCTCTGGTCGCTATAACAGGGCAAGTCCCTCGAAGGATGATCGGTACTGATGCGTTCCAGGAGACGCCCATTGTTGAGGTGACAAGATCGATCACTAAGCATAATTATCTTGTTCTTGATGTAGACGATATTCCTAGGATTGTGAAAGAGGCGTTCTTCTTAGCTACTTCGGGGAGACCAGGCCCAATATTAATCGACGTGCCAAAAGATATACAGCAACAGCTTGCGATTCCTAACTGGGACCAACCGATTAAGCTGCCGGGATACATGGCGAGGCTTCCCAAGTCGCCGGATTCGAACCTGTTAGAGCAGATTGTGAGGTTGATATTGGACTCCAAGAAGCCAGTTCTGTATGTTGGCGGTGGATGTATGAACTCAAGCGAGGAATTGAGGCGATTTGTGGAACTTACTGGAATTCCAGTTGCTAGTACTTTGATGGGCCTAGGTGTATATCCCATTCCTGACGAATATTCCCTCCAAATGCTTGGAATGCATGGGACAGTGTACGCTAATTATGCCATCGATAAAAGTGATTTGTTGCTTGCATTTGGGGTGAGGTTTGATGATCGGGTGACAGGAAAGCTTGAAGCCTTCGCTAGTCGAGCTAAAATTGTTCATATAGACATTGATTCAGCTGAGATTGGTAAAAACAAGCAGCCTCATGTTTCCGTTTGTGCAGATTTGAAGTTGGCTTTGAAGGCCATTAACCAGAGACTTGAGAGCAAAGGAATCAAAGATGAAGTTGATTTTCAAGCTTGGAGAGAAGAGCTGAGCGAGCAAAAACTCAAATTCCCTTTAAGTTACAAGACATTTGAGCAAGCCATTTCTCCTCAGTATGCCATTCAGGTATTGGATGAACTGACAAATGGGGATGCAATTATAAGTACTGGAGTAGGACAACACCAGATGTGGGCGGCTCAATTTTACCAATATAAGCGACCTAGACAGTGGTTAACATCAGGGGGTCTTGGGGCTATGGGTTTTGGATTGCCTGCTGCAATTGGGGCTGCTGTGGCTAACCCAAACACTCTTGTAGTGGACATTGATGGTGATGGAAGTTTCATAATGAATGTTCAGGAACTTGCCACTATTAAGGTGGAGAATCTCCCTATTAAGATACTGTTGCTGAATAATCAACACTTGGGTATGGTTGTTCAGTGGGAAGATAGATTTTATAAATCTAACAGAGCTCACACATATCTGGGAAACCCATCTAAGGAGACTGAGATCTTCCCAAATATGTTGAAGTTTGCTGAAGCTTGTGGAATACCAGCAGCTCGAGTGATCAAGAAAGAGGACCTTAGAGTAGCAATTCAGAAAATGTTGGATACTCCTGGTCCCTATCTTCTTGATGTTATAGTTCCCCATCACGAGCATGTCTTGCCCATGATTCCAAGTAATGGAACCTTCAATGATGTGATCACAGAGGGTGATGGCAGAACATCCGAGTAA 1992 0.4689 MATLAPNNLFSAFSYPSPSSLPSTSKKHLSIPFFTISKKPIHSRAIRISSSISNPSGPSPKPAQASSAAVTTTSTDSEAFVSRFTPDEPRKGADILVEALERQGVTDVFAYPGGASVEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVKEAFFLATSGRPGPILIDVPKDIQQQLAIPNWDQPIKLPGYMARLPKSPDSNLLEQIVRLILDSKKPVLYVGGGCMNSSEELRRFVELTGIPVASTLMGLGVYPIPDEYSLQMLGMHGTVYANYAIDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKAINQRLESKGIKDEVDFQAWREELSEQKLKFPLSYKTFEQAISPQYAIQVLDELTNGDAIISTGVGQHQMWAAQFYQYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPNTLVVDIDGDGSFIMNVQELATIKVENLPIKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPSKETEIFPNMLKFAEACGIPAARVIKKEDLRVAIQKMLDTPGPYLLDVIVPHHEHVLPMIPSNGTFNDVITEGDGRTSE 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0640 663 ProSitePatterns Thiamine pyrophosphate enzymes signature. 514 533 IPR000399 GO:0000287|GO:0030976
Lele14g0640 663 FunFam Acetolactate synthase 85 268 - -
Lele14g0640 663 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 91 655 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Lele14g0640 663 MobiDBLite consensus disorder prediction 49 81 - -
Lele14g0640 663 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 91 254 IPR012001 GO:0030976
Lele14g0640 663 SUPERFAMILY DHS-like NAD/FAD-binding domain 277 445 IPR029035 -
Lele14g0640 663 Gene3D - 79 273 - -
Lele14g0640 663 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 477 632 IPR011766 GO:0003824|GO:0030976
Lele14g0640 663 Gene3D - 282 446 - -
Lele14g0640 663 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 455 655 IPR029061 -
Lele14g0640 663 FunFam Acetolactate synthase 275 446 - -
Lele14g0640 663 Gene3D - 447 633 - -
Lele14g0640 663 Pfam Thiamine pyrophosphate enzyme, central domain 283 414 IPR012000 GO:0000287|GO:0030976
Lele14g0640 663 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 84 268 IPR029061 -
Lele14g0640 663 CDD TPP_AHAS 455 646 IPR039368 GO:0030976
Lele14g0640 663 FunFam Acetolactate synthase, mitochondrial 445 661 - -
Lele14g0640 663 CDD TPP_PYR_POX_like 94 249 - -
Lele14g0640 663 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 89 652 IPR045229 -
Lele14g0640 663 MobiDBLite consensus disorder prediction 49 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0640 Lele-ChrLele14 17796835 17798826 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0640 14 17796835 17798826 Lele15g1730 15 10362948 10364942 hybridization
Lele14g0640 14 17796835 17798826 Lele16g1769 16 10367158 10386260 hybridization