Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0613 ATGCCTTTCGTGCGGGTCAAAACTTACTTGTTAAGGTTACAGGAAATAGCTAGTGAGATACTGAACTCTGCATCCCAGAAAATGCAGTCACAAGAAACAATACTGAGAAAAATATACATGAAAGCTAACCAGCCTGTTACTCTCAAGGGAAAGTATGACCAGTGGAATCATAATCCAAGCCTGTTGCTTGTTGATGAGCCTACTTCAGGTCTTGATTCAGCTACAGCCAAAAGAATTGTGTTAGGTCTGTGTGACTTAGCAAAATGTGGAAGAACCATTGTTGTGACTATTCACCAGCCTTCTAGCAAGATATTTTACGTTTTAGAAGGCCTTCTTTGGTGGGAATCCAGATTTCATAACATGCAAGATCAGGTGTCATTGCTATTATTTTATACCCAGTTCTGTGGACTAGCCATAGACGCGGTACTGGTTTATAATGAGAGGTCTGCTGAAACAGTTGGATCAGTAGTGATGACCATATGTTCTTGCCAATGGCTTATGAAGTTGCACAATTCAATCTCTGAATATTTCAAGGAAATTCTTGTGAACAACGGAACATGCAATAATGTTCAAATCTCAAAGGCATTAAACCTCGAGTTCTTGTTGATATATAGATTGGTGAGGTTGGTGGTGGAAGTTATGGATAGCACCGATTCATCTTCAGGGTGTCAGCTTCCTCCCGGATTCCGATTCCATCCCACTGACGAAGAGCTCGTCGTTCACTACCTCAAGCGAAAAGCCGCCTCTGCTCCGCTTCCCGTCGCCATCATCGCCGACGTCGATCTCTACAAGTTCGATCCGTGGGAGCTTCCAAGTAAGGCTGCTTTTGGGGAGCAAGAGTGGCTCACTGACAACAATTCTTACAATAATTCTACCCCTAAGACTCTTCCTCTGGCTTCTGATCCTGCGTCACAATCCTCAAAGAAGAACTCGTTAAGGCTTGACAATTGGGTTCTGTGTCGAATATACAAGAAAAGCAATAGTAGTATGAAGACGATTTTGCAAAGGTCGCCATTGATGGCGCAGGAGAGGGAGATTTGTATGGAGGCTATGCTTCCGACCATCTCAAGTTTATCAATCGTTAATACTGCCACCCACCAAAACCCTTCATTAGGACCTGAGAATGATGACAACTTGTTCGATGGATTTCTGGGAATCGGTGGCGGAGGAGGTGGTGGTGGTGGTGGTGATTCTCATGATCATCGCTTGTCTGCCGTGGGAGGACACCTGCCATCGCCATTTTGGAACGAGACGACGTCGGGGTCTCCGTCGGGGTCGTCTTCGTCTAGCAAGAGATTCCACGGTGATCTGAACAGCACAGGGATGAGTACTACTTCAGCGGAGGAGAACAGTTCGTTCATTTCTCTGCTAAGCCAGCTTCCTCCCCAGAATATGACGACGTTTCTTGGCTCCGTCGGTGACGGTGTTTTGAGGCAGCAGTTTCAACTTCCAACAAGCCTGAATTGGACCTCATAA 1476 0.4566 MPFVRVKTYLLRLQEIASEILNSASQKMQSQETILRKIYMKANQPVTLKGKYDQWNHNPSLLLVDEPTSGLDSATAKRIVLGLCDLAKCGRTIVVTIHQPSSKIFYVLEGLLWWESRFHNMQDQVSLLLFYTQFCGLAIDAVLVYNERSAETVGSVVMTICSCQWLMKLHNSISEYFKEILVNNGTCNNVQISKALNLEFLLIYRLVRLVVEVMDSTDSSSGCQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKAAFGEQEWLTDNNSYNNSTPKTLPLASDPASQSSKKNSLRLDNWVLCRIYKKSNSSMKTILQRSPLMAQEREICMEAMLPTISSLSIVNTATHQNPSLGPENDDNLFDGFLGIGGGGGGGGGGDSHDHRLSAVGGHLPSPFWNETTSGSPSGSSSSSKRFHGDLNSTGMSTTSAEENSSFISLLSQLPPQNMTTFLGSVGDGVLRQQFQLPTSLNWTS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0613 491 PANTHER NAC TRANSCRIPTION FACTOR 56 225 282 - -
Lele14g0613 491 Gene3D NAC domain 234 294 IPR036093 GO:0003677|GO:0006355
Lele14g0613 491 MobiDBLite consensus disorder prediction 390 446 - -
Lele14g0613 491 MobiDBLite consensus disorder prediction 413 446 - -
Lele14g0613 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 102 IPR027417 -
Lele14g0613 491 MobiDBLite consensus disorder prediction 286 308 - -
Lele14g0613 491 SUPERFAMILY NAC domain 221 325 IPR036093 GO:0003677|GO:0006355
Lele14g0613 491 Pfam No apical meristem (NAM) protein 226 281 IPR003441 GO:0003677|GO:0006355
Lele14g0613 491 Gene3D - 47 112 IPR027417 -
Lele14g0613 491 ProSiteProfiles NAC domain profile. 225 367 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0613 Lele-ChrLele14 17581699 17589097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0613 214 491 NAC Transcription Factor Family AT3G15510 33.770 3.33e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele14g0613 NAM 1.1e-15 No_clan