Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0599 ATGGCTGGTCGCTACGACAGTAACCCCTTCGATGAAGAAGAGGTCAATCCCTTCTCTGACCCAGCTGTAAGGGGTAAATCATCAAACCAGTCAAACTATGGTGGGGGTGCATTTTACACTACTAATCCTGGAAGCGTTGCCCCTGCCACAAATTCAAGGCTTGCACCTCTTAATCCAGAACCTGCTGATTATGGCTTTGGCACAACAATTGATATACCTCTTGATAATTCATCAACGGATATAAAAAAGAAGGAGAAGCAACTCCAAGCCAAGGAGGCTGAATTGAAAAGGAGGGAGCAGGAAGTAAGACGTAGAGAGGAAGCTGCTGCTCGAGGTTTGGTGCTGTGCCTTTTATGGAATATCATAGCTGTCACTTCAGCTTGGATTAAGGGCGAAGGCGTGAAAATCTGGTTTCTTGCTCTCATCTACTTCATAGCAGGGGTTCCTGGAGCCTATGTTCTGTGGTATCGGCCATTGTATCGTGCTTTCAGGTCTGAAGGTGCTATGAAGTTTGCATGGTTTTTTCTGTTCTACGCGGTTCACATTGGATTTTGCATATTTGCTGCAGTTGCTCCTCCTATTGTCTTCAAAGGAAAATCCCTGACAATGTTGACCCTAACAACTTGTTGGTTATGTACACAGCAAGTATTTATGTACTTCCGTGGGAGTGGAAAGGCTGCTGAGATGAAACGGGAGGCTGCAAGAGGAGCAATGAGGGCTGCACTGTGA 729 0.4595 MAGRYDSNPFDEEEVNPFSDPAVRGKSSNQSNYGGGAFYTTNPGSVAPATNSRLAPLNPEPADYGFGTTIDIPLDNSSTDIKKKEKQLQAKEAELKRREQEVRRREEAAARGLVLCLLWNIIAVTSAWIKGEGVKIWFLALIYFIAGVPGAYVLWYRPLYRAFRSEGAMKFAWFFLFYAVHIGFCIFAAVAPPIVFKGKSLTMLTLTTCWLCTQQVFMYFRGSGKAAEMKREAARGAMRAAL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0599 242 Coils Coil 74 108 - -
Lele14g0599 242 MobiDBLite consensus disorder prediction 1 54 - -
Lele14g0599 242 Pfam SCAMP family 110 193 IPR007273 GO:0015031|GO:0016020
Lele14g0599 242 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 7 107 IPR007273 GO:0015031|GO:0016020
Lele14g0599 242 MobiDBLite consensus disorder prediction 22 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0599 Lele-ChrLele14 17463365 17469346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0599 1 242 Miscellaneous Gene Families AT1G11180 51.307 1.35e-97 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0599 14 17463365 17469346 Lele14g0601 14 17484312 17486554 CCT
Lele14g0599 14 17463365 17469346 Lele16g1810 16 10707624 10709850 CCT
Lele13g0708 13 19116098 19116400 Lele14g0599 14 17463365 17469346 CCT
Lele15g1774 15 10699215 10699523 Lele14g0599 14 17463365 17469346 CCT
Lele16g1806 16 10666382 10666690 Lele14g0599 14 17463365 17469346 CCT
Lele14g0599 14 17463365 17469346 Lele15g1780 15 10772167 10777618 hybridization
Lele14g0599 14 17463365 17469346 Lele16g1812 16 10727656 10733485 hybridization