Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0588 ATGGCCACTGTTGGGTCTTCGTCTTCCTCGTCAAAGGTCTGCTACAATTCCGACTGCAAAGAATTGAAGTCAGACAGACCTAAGAAGGGTTGGAGACTCCGTACTGGAGACTTCGCCGAGCTCTGTGATAGATGCGGTTCTGCTTTTGAGGAAGGAAGGTTCTGTGAAATTTATCACTCAAAAGCTTCTGGTTGGAGGACTTGTGAGACATGTGGGAAGGGAATTCATTGCGGGTGTATTGTTTCAAGTACAGCCTTTATGTTGTTGGATCCTGGAGGCATTGAATGCATTCCATGCGCAAGGAAGAATAGTATTTTGTCATCTAAACTACCTTGGTCAGCACCTGTTTCTCTTCAAGCTCGTTTTAGAGAGCTGACCGAGAAAAATTGGAGTCAGTTAGCTGGATCAGGTCCTGTTCCGTGGAAGCAAGCACCCACTCTGTTCAATACAACTTCTTCATCTGACCGGCACCCAGATGTGCCATCTGTAGTTGAAATATCTAGTGTTGACAACATTTATGGAAATGAAAGGATAGCTGCCTCATCTCTGGAAAAGAAAAGTGATGATCTTTCTGGAATACCGGCTAATTGGAACGTAAAGATTGGCGCGCGGGGAATGATGTTTATAAATGGAATGCGGAATGATGAAAAGTCTAGTTCATGCTTGAATATGTGCCAGCAACCTTCTCTTAAGGAGGATTCATCAACCCCACCATTTGGTTTGACTGTACCATATGCACATCAACATGAAAGAAATGGTCAGGTTGGGGTAAGTGGAAGTCATCCACAACAAACTCCTCCACCCCCTCTTGGAAAGCAATTTAGCAGCCCTGTACATGTTGCACTTGATTCATCAGGTGAATCACAAGCACGAAATGGACGGCCTAGAGCAGATGCCCGAGGAAGGAACCAGTTACTGCCACGTTACTGGCCCAGGTGCACTGATCAGGAGTTACATCAAATATCTCTTGACTCTAATTCAGTTATAACTCCATTGTTCCAAAAAACGTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTTTAGTGCTACCCAAAAAATGTGCTGAGGCCTACTTTCCACCAATTTCTCAGCCTGAAGGGTTGCCACTTAAAATCCTTGATGCCAAAGGCAAGGAATGGATATTTCAATTTCGCTTTTGGCCCAACAATAACAGTAGAATGTATGTTTTAGAAGGCGTAACTCCATGCATACAGTCCATGCAATTGCAAGCTGGGGATACAGTAACATTTAGTCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGATTTCGAAAGGCTTCAAGTGCTACCCAGTCTGATCAGGACAATGAAACAAACAAGACTGGAAATGGGTATTCTGCACATGGTGAAGTTGAATTGGATCCTAGCTCATGGTCTAAAGTTGACAAATCAGGATATATAGCAAAAGAAGCCCTGGGGAGCAAATCTTCCATTTCTAGGAAGAGAAAGGGTAGCGCTTTGGGTTCAAAGAGTAAGCGACTAAGAATTGAAAATGAGGATCTAATAGAGTTGAATATTACATGGGAAGAAGCTCAAGGCCTGCTCCGTCCCCCTCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAGTATGAGGATGCTCCAGTGCTAGGGAAACCAACAATTTTCACTACGGACAGTGTTGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTAAAAAATGGCGCAAATTACCAGCTAATGCTCTTCTAACATCAAGATGGACATGTTCAGATAATCCATGGGACCCAGAAAGATCATGTTCAGCTGCACAGGAGTTGACAGCAGAACAGCTTGAAGATTTGCTTCCCCCTTGTAACTCAGATGTATCCAAGAAAATGAAGACCGCCAAGCAGGATCCTGATAATGTCGAAGCTTTGGAAGGACTTGACACTCTTGCTAACTTAGCTATCTTAGGAGAGGGGGAGGCTCTCCCAGCATCTGCCCAAGCCACAACAAAACACCCTCGGCATAGACCTGGCTGCTCTTGCATTGTCTGCATTCAGCCTCCTAGTGGGAAGGGCCCCAAGCATAAGCAGACTTGCACATGTAATGTTTGCTTAACTGTGAAGCGCCGTTTCCGTACCTTGATGTTACGGCGTGAGAAGAAACAATCAGAGAGAGAAGCAGAGACGACACGTAAAAAGCCGCAGCCCCTGCCACCTCAGCCGCCACCACCTATGTCAGAGATATTGCTTGATCATTCTTCCCTGCCTTGCAGTAACACAGGAGATAGTAGTAGTCCTAATCAGAACAGGGAGGGCAATGAAGCTTCTGATGATGACCCTAACAAAACAAAGTCATCCGCATCGCCATTTAAAGGCCAGATTGACCTCAATATTCAGCCAGAGAGAGAGGAAGAGTTGTCTCCCAGTTCAGATTCTGGAAGTATGATTAAGATGCTCCATAATGCTACTGAGAGGTATTTGAGGCAGCAGAGTATGGTGAACTCTTTCGCCGGAGATACCTCAGGTGGACAGTCGCAGCAAGTTGGAGACGACGCGATGGAAGAGAAACTCTGCAATGGTGTAGCCCTTGGCAGTAGTAATCATAATTCTGACAAGGAGCATGCCCAAACATTGTCTATGAACGTGTGA 2637 0.4547 MATVGSSSSSSKVCYNSDCKELKSDRPKKGWRLRTGDFAELCDRCGSAFEEGRFCEIYHSKASGWRTCETCGKGIHCGCIVSSTAFMLLDPGGIECIPCARKNSILSSKLPWSAPVSLQARFRELTEKNWSQLAGSGPVPWKQAPTLFNTTSSSDRHPDVPSVVEISSVDNIYGNERIAASSLEKKSDDLSGIPANWNVKIGARGMMFINGMRNDEKSSSCLNMCQQPSLKEDSSTPPFGLTVPYAHQHERNGQVGVSGSHPQQTPPPPLGKQFSSPVHVALDSSGESQARNGRPRADARGRNQLLPRYWPRCTDQELHQISLDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSATQSDQDNETNKTGNGYSAHGEVELDPSSWSKVDKSGYIAKEALGSKSSISRKRKGSALGSKSKRLRIENEDLIELNITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTDSVGEKIQWAQCEDCKKWRKLPANALLTSRWTCSDNPWDPERSCSAAQELTAEQLEDLLPPCNSDVSKKMKTAKQDPDNVEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKPQPLPPQPPPPMSEILLDHSSLPCSNTGDSSSPNQNREGNEASDDDPNKTKSSASPFKGQIDLNIQPEREEELSPSSDSGSMIKMLHNATERYLRQQSMVNSFAGDTSGGQSQQVGDDAMEEKLCNGVALGSSNHNSDKEHAQTLSMNV 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0588 878 Gene3D - 311 438 IPR015300 -
Lele14g0588 878 ProSiteProfiles Zinc finger CW-type profile. 560 609 IPR011124 GO:0008270
Lele14g0588 878 MobiDBLite consensus disorder prediction 432 452 - -
Lele14g0588 878 SUPERFAMILY DNA-binding pseudobarrel domain 330 433 IPR015300 -
Lele14g0588 878 MobiDBLite consensus disorder prediction 748 767 - -
Lele14g0588 878 ProSiteProfiles B3 DNA-binding domain profile. 333 434 IPR003340 GO:0003677
Lele14g0588 878 FunFam B3 domain-containing transcription repressor VAL1 311 438 - -
Lele14g0588 878 MobiDBLite consensus disorder prediction 712 809 - -
Lele14g0588 878 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 11 839 - -
Lele14g0588 878 CDD B3_DNA 331 432 IPR003340 GO:0003677
Lele14g0588 878 MobiDBLite consensus disorder prediction 252 303 - -
Lele14g0588 878 MobiDBLite consensus disorder prediction 859 878 - -
Lele14g0588 878 MobiDBLite consensus disorder prediction 431 464 - -
Lele14g0588 878 Gene3D - 555 611 - -
Lele14g0588 878 Pfam CW-type Zinc Finger 565 606 IPR011124 GO:0008270
Lele14g0588 878 SMART B3_2 333 434 IPR003340 GO:0003677
Lele14g0588 878 Pfam B3 DNA binding domain 333 432 IPR003340 GO:0003677
Lele14g0588 878 MobiDBLite consensus disorder prediction 713 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0588 Lele-ChrLele14 17359667 17369268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0588 10 717 B3 DNA Binding Superfamily AT4G32010 46.250 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele14g0588 B3 9.6e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0588 14 17359667 17369268 Lele13g0671 13 18803658 18805400 CCT
Lele14g0588 14 17359667 17369268 Lele14g0570 14 17220597 17222342 CCT
Lele14g0588 14 17359667 17369268 Lele15g1813 15 11035205 11036944 CCT
Lele14g0588 14 17359667 17369268 Lele16g1842 16 10981457 10983430 CCT
Lele14g0588 14 17359667 17369268 Lele14g0588 14 17359667 17369268 ECH
Lele14g0588 14 17359667 17369268 Lele15g1794 15 10865001 10874824 hybridization
Lele14g0588 14 17359667 17369268 Lele16g1825 16 10826679 10837868 hybridization