Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0564 ATGCAACCGGGCACAGATTCCATCAAGTTCAGTTTTTTCGCCGACGAACACCAAGTATACTACGCGTTCTCGATCGGAAACCAATCATTGCTATCGAGGCTCTCTGTGGACTCCAACGGCGAGCTTCAGAGGATGACGTGGATTGAAAGCACACAAGTGTGGACAAAATTCTGGTACGCTCCGAAAGACCAATGCGATTACTACAGACAGTGTGGTCCGTTCGGGGTCTGCGATGCGAATGCTTCGCCGGTTTGCGTGTGTATGAGAGGGTTCAGGGCGAAGAACTTGCAGGCGTGGAATCTGAGAGATGGGACAGATGGGTGCGTGAGGAACACAGAGCTGGATTGTGGGGGAGACGAGTTCTTGGAGATGAAGAACGTGAAGTTGCCGGACACAACCTCGGTGTTTGCGAACAGGAGCATGAACATTGTGGAATGTGGGGATTTGTGTCTCAAGAACTGCAACTGCACTGCGTATTCAAACATAGAAATCAGAAATGGCGGAAGTGGGTGCGTCATGTGGAGTGGCGATCTCATTGACATAAGGCAGTATCCTCAAGGTGGACAGACTCTGTTTGTCAGATTAGCAGCTTCTGATGTCGGATCTGCAAATGCTTCTCACAGCACAAATGTAAATGTAGCTATGGTTGTAGGAATTACGGTTGCTGCTGCAGCTATTATACTTTTGGTATTGGGTCTCTTTTTCCTATGCAAGAAGAAGAAAGTGCGACGCCTAATCAAAGTGAAAAATGAATACAGAGGCTCCATAGAGAGAAGCCAAGATTTGCTAATGACTGAGGGAGTGATTTCAAGTAACAGAGAATACTCATCAGAAAGGAACAACATGGATGACCTGGAATTGCCATTATTTGATTTTAATACTTTAAGAATGGCTACAAACAACTTTTCTGAATCAAATAAACTTGGACAAGGTGGCTTTGGTACTGTTTACAGGGGTAGGCTGGTGGAAGGACAGGAAATTGCTGTGAAGAGGTTGTCAAAAAGCTCTGTGCAAGGGATTGAAGAGTTCAAGAATGAGGTCATGTTAATTGTTAGGCTTCAGCACCGAAATCTTGTTCGGCTGTTTGGTTGTTGCATTGAGATGGAAGAGAAGATGCTGATTTATGAATACTTGGAAAACAGAAGCCTTGATTCTATTTTGTTTGAGAAAGAAAAAAGATCTTTGTTGGACTGGCAAACCCGATTCAACATTATATATGGAACAGCTAGAGGTCTTCTCTATCTTCATCAAGATTCTAGGTATAAGATTATCCATAGGGATCTCAAGGCAAGCAACGTTCTACTTGACAAAGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAATTTTCACCACTAACCAAACAGAAGCAAATACATTGAGAATTGTTGGAACATATGGCTACATGTCTCCTGAATATGCTATGGATGGAATCTTCTCGGTAAAATCAGATGTTTTTAGTTTCGGGGTATTGGTGTTAGAGATCATTAGTGGCAAAAAGAACAGAGGGTTCTATTACTCAAACAAGGAGCTGAATCTTCTTGGACATGCTTGGATGCTATGGAAGGAAGGAAATGCTTTGGAACTGGTAGATTCATCCTTCGGAGACTCATATGTGGAATCTGAAGTTCTTAGATGCATACAGGTTGCACTCTTATGTGTCCAAGAGCGTGCAGAAGATAGGCCAACAATGTCTACAGTAGTGTTGATGCTGAGTAGTGAAACTGCAACAATGCCACAGCCCAAAAACCCAGGATTTGCCCTCGGAAGAAATCCGATTGAAACCGATTCTTCTTCAAGCAAGATAGACGAATCATGCACTGTGAACCAAGTTACAGTCACAATGCTAAATGCCAGGTAG 1866 0.4309 MQPGTDSIKFSFFADEHQVYYAFSIGNQSLLSRLSVDSNGELQRMTWIESTQVWTKFWYAPKDQCDYYRQCGPFGVCDANASPVCVCMRGFRAKNLQAWNLRDGTDGCVRNTELDCGGDEFLEMKNVKLPDTTSVFANRSMNIVECGDLCLKNCNCTAYSNIEIRNGGSGCVMWSGDLIDIRQYPQGGQTLFVRLAASDVGSANASHSTNVNVAMVVGITVAAAAIILLVLGLFFLCKKKKVRRLIKVKNEYRGSIERSQDLLMTEGVISSNREYSSERNNMDDLELPLFDFNTLRMATNNFSESNKLGQGGFGTVYRGRLVEGQEIAVKRLSKSSVQGIEEFKNEVMLIVRLQHRNLVRLFGCCIEMEEKMLIYEYLENRSLDSILFEKEKRSLLDWQTRFNIIYGTARGLLYLHQDSRYKIIHRDLKASNVLLDKEMNPKISDFGMARIFTTNQTEANTLRIVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYYSNKELNLLGHAWMLWKEGNALELVDSSFGDSYVESEVLRCIQVALLCVQERAEDRPTMSTVVLMLSSETATMPQPKNPGFALGRNPIETDSSSSKIDESCTVNQVTVTMLNAR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0564 621 Pfam Receptor serine/threonine kinase 257 292 IPR022126 GO:0004674
Lele14g0564 621 ProSiteProfiles Protein kinase domain profile. 302 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0564 621 CDD PAN_AP_plant 112 196 - -
Lele14g0564 621 CDD STKc_IRAK 308 573 - -
Lele14g0564 621 Pfam PAN-like domain 116 181 IPR003609 -
Lele14g0564 621 Pfam Protein tyrosine and serine/threonine kinase 305 571 IPR001245 GO:0004672|GO:0006468
Lele14g0564 621 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lele14g0564 621 Gene3D Hepatocyte Growth Factor 110 194 - -
Lele14g0564 621 Pfam S-locus glycoprotein domain 6 94 IPR000858 GO:0048544
Lele14g0564 621 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 378 581 - -
Lele14g0564 621 Gene3D Phosphorylase Kinase; domain 1 275 377 - -
Lele14g0564 621 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 267 377 - -
Lele14g0564 621 SMART serkin_6 302 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0564 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Lele14g0564 621 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
Lele14g0564 621 ProSiteProfiles PAN/Apple domain profile. 116 196 IPR003609 -
Lele14g0564 621 SUPERFAMILY Protein kinase-like (PK-like) 282 573 IPR011009 -
Lele14g0564 621 SMART ntp_6 116 195 IPR003609 -
Lele14g0564 621 Pfam Domain of unknown function (DUF3403) 575 621 IPR021820 GO:0004674
Lele14g0564 621 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 60 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0564 Lele-ChrLele14 17174228 17178240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0564 197 588 Receptor kinase-like Gene Family AT4G23190 52.897 1.28e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele14g0564 PK_Tyr_Ser-Thr 6.8e-48 CL0016