Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0562 ATGAGTGGTTTTGTGGGCCGAAATGAGAGTAGGAATGCAGGCCGACAACAGATGAGCATTGTTGGGCCAAGGGAAGTTAGTGAGAACAAAATGGCCCAATATGAGCCAGCTGAAAGTGCAAGGGGAATGAATGATGAAGATATGGGGGCAGCCGGAAAAGCTTTCGGTAATGCCGTTAAGGAATTAATGAGGAGATTTGCTCCAAAGATTGTGGTTTTGGTGGAAACTAAGATTAGCACTCTAATTATTGATAGATCGGCAATTGAATGGAAGTCAATGTGTACTAGGATGCTGCTTAAAGACACAGAACCGATCATCATTCATGGCAAACTAGAATCGACAGTTGTGAGGATTATGGGATTCAGACATATTCTTAATTTGATTAATGTTGTCTTCCTAATTGCCATCTTCTGTGTGGCTTTAGTCTCTGCCAAAGATACGATTACATCAGCCCAGTTCATCAGAGATTCTGAGACACTGAGCTCAAACAGCACTGACTTCAAACTAGGATTCTTCAGCCCTCCGAATTCAACACATCGCTATGTGGGAATCTGGTATCTCTCTCGAGACAACCTCGTATGGGTGGCTAACAGAGACCAACCCATCAACGATTCTTCCGGGGTCATCACAGTTTCCCAGGACGGCAACCTTGTGGTATTGAATGGACAAAAACATGTCGTCTGGTCGTCAAACGTGTCAGACAATGGTACAAACACGACAACGGCCCAGCTTCAAGATTCTGGCAACCTCGTCCTCCAAGTGTTTGATGATAACACTGGAAAGAAATCAATATGGCAGAGCTTTGAACATCCCGCTGATGCAGCAGTTCCAAACATGAAGATCAGTGCCAACAGATTCACAGGGAAGAAGATAGAGTTTGTGTCATGGAGAAGCCCTTCTGATCCATCACCTGGGTTCTTCTCTGCGAGTCTCGAACGCCTTGTTCTTCCAGAAGTTTTCTTGTGGGTCAATAGAACTCAGCCCTATTGGAGAACGGGTCCATGGAATGGAAGGGTCTTCATCGGAGCACCACTGATGTCAACTGGGTATTTATATGGATGGTCTCTGAGAAATCAAGATGATGGGACTGTTTATGTAACTTACAGTTTTATTGACCATGCTGCTTCTGGAATTCTTCAATTGAACCCACAAGGAAAGCTTAGATTGGTAAGGTTCTACAACAAGAAGAAATATCTGGATGTGGTATTGGATCTAGAAGACTGTGATCACTACGGCATGTGTGGGGACTTTGGGAGCTGTAATCAACAGAGTACACCAATGTGTAGTTGCTTAACTGGGTTTGAGCCAAAGGTTACAGAGGAATGGAAAAGAGAGAATTGGACAAGTGGGTGTGTGAGAAAATCAGCGTTGATGTGTGAGAGCTTGAAGAATGGAAGTTATAAAGCTGGGGAAGAAGATGGGTTTCTGAGATTTCAGAATATGAAAGTTCCAGATTTTGCAGAAAGGTCAGGTGTTGACACAGAAGCTCAATGCAGAACCGAGTGCTTGAAGAATTGCTCTTGTTTGGCATATGCATTTGATACTGGCATTGGATGCATGTATTGGACTCAGCCCTTGATTGACATACAAGAATTCTCTAATGAAGGAGTTGATCTTTACATTCGTGTGGCTCATTCAGAACTTGGAAACGGTTCTGAGAAAAGCGCAAATAAGAGAAAAATCATCGCAGTTACAGTATCGATAGGAATGGTTATCTTAGTTGCATTTGTATGCCTATTAGTCATCTATACCTGTGGCTCTCGGAGCAAAACGGTCCATAAGCAAAGTGAAAATCAGAGTCAAAGAGTGAATGACGGCAACAAACAAGTTAAGTTAGATGAGCTTCCAGTATTTGATTTTGAAGAGGTTGCATCTGCTACAAATAACTTTCACTTAGCTAACATGCTAGGGAAGGGTGGTTTTGGTCCAGTTTACAAGGGAATATTGCAAGATGGTCAGGAAATTGCAGTAAAAAGGCTGTCCAGAGCATCCGGACAAGGTCAAGAAGAATTCATGAATGAGGTGTTAGTCATCTCGAAACTTCAACATCGCAATCTTGTAAAACTTCTTGGTTGTTGCATTGAAGGAGATGAAAAGATGTTAATCTATGAATTTATGCCAAATAAAAGCTTGGACGCTCTTCTCTTTGATCCAATCCAAGGAAAATTTTTGGACTGGAGAAAACGATATAATATAATTGAAGGAATAGCTCGAGGCTTGCTTTATCTTCATAGAGATTCTAGACTAAAAATCATACACAGAGATTTAAAAGCAAGTAATATCTTGTTGGATGGGGAGATGAATCCAAAAATATCAGATTTTGGTCTAGCTAGAATTTTTGGAGCAACCGAAGATGTAGTAAATACTAAAAGAGTCGTCGGAACATATGGTTATATGTCTCCAGAATATGCAATGGAAGGTTTGTTTTCCGAAAAATCCGATATTTACAGTTTTGGAGTTTTGTTATTGGAGATTGTTAAGGGAAAAAGAAACAGCAGCTTCCACACTGATGAAGAGTCTCTTAGCCTTATAGGACTTGCATGGAGGCTATGGAATGAAGAGAAAATTGTGTCTTTAGTAGATCCAGATATATGGGATTCATGCAATGGGAGCGAAATATTGAAGTGCATACACATAGGGCTTCTATGTGTGCAAGAAGCAGCGAAACAAAGGCCAAGCATGACCAATGTGGTTATGATGCTTATAAGTGAGAATGTTCATCTTCCTCCTCCAAAGCAAGTAGCATTTGTGCATAAGCATTGGGTTTCAAGTTCAGAGTCCTCTAATTCTAAGGAACGTCAATTTAATTCCCTAAATAATGTAACTCTTACTGATATGGAAGGAGGAACAAGAAACTGGAAAAGTTGCATCTTGCTCGAGTTTATCCGAGCAAGGGTGGTTTTGGCTCCAAAATTTAAGAACTTGGTATTAAAAGGCTTAGAGCCTGCAACCAATAGATCCGCCAGAACACGAAGGCGTCGAGGCATAGAGCAACTCAGTTATGTGATTGATCCTGATATGCAAGCTCTCTCTTTTTGA 3039 0.4123 MSGFVGRNESRNAGRQQMSIVGPREVSENKMAQYEPAESARGMNDEDMGAAGKAFGNAVKELMRRFAPKIVVLVETKISTLIIDRSAIEWKSMCTRMLLKDTEPIIIHGKLESTVVRIMGFRHILNLINVVFLIAIFCVALVSAKDTITSAQFIRDSETLSSNSTDFKLGFFSPPNSTHRYVGIWYLSRDNLVWVANRDQPINDSSGVITVSQDGNLVVLNGQKHVVWSSNVSDNGTNTTTAQLQDSGNLVLQVFDDNTGKKSIWQSFEHPADAAVPNMKISANRFTGKKIEFVSWRSPSDPSPGFFSASLERLVLPEVFLWVNRTQPYWRTGPWNGRVFIGAPLMSTGYLYGWSLRNQDDGTVYVTYSFIDHAASGILQLNPQGKLRLVRFYNKKKYLDVVLDLEDCDHYGMCGDFGSCNQQSTPMCSCLTGFEPKVTEEWKRENWTSGCVRKSALMCESLKNGSYKAGEEDGFLRFQNMKVPDFAERSGVDTEAQCRTECLKNCSCLAYAFDTGIGCMYWTQPLIDIQEFSNEGVDLYIRVAHSELGNGSEKSANKRKIIAVTVSIGMVILVAFVCLLVIYTCGSRSKTVHKQSENQSQRVNDGNKQVKLDELPVFDFEEVASATNNFHLANMLGKGGFGPVYKGILQDGQEIAVKRLSRASGQGQEEFMNEVLVISKLQHRNLVKLLGCCIEGDEKMLIYEFMPNKSLDALLFDPIQGKFLDWRKRYNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDGEMNPKISDFGLARIFGATEDVVNTKRVVGTYGYMSPEYAMEGLFSEKSDIYSFGVLLLEIVKGKRNSSFHTDEESLSLIGLAWRLWNEEKIVSLVDPDIWDSCNGSEILKCIHIGLLCVQEAAKQRPSMTNVVMMLISENVHLPPPKQVAFVHKHWVSSSESSNSKERQFNSLNNVTLTDMEGGTRNWKSCILLEFIRARVVLAPKFKNLVLKGLEPATNRSARTRRRRGIEQLSYVIDPDMQALSF 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0562 1012 ProSiteProfiles Bulb-type lectin domain profile. 145 265 IPR001480 -
Lele14g0562 1012 CDD B_lectin 152 271 IPR001480 -
Lele14g0562 1012 Gene3D Transferase(Phosphotransferase) domain 1 706 908 - -
Lele14g0562 1012 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 706 909 - -
Lele14g0562 1012 SMART ntp_6 470 543 IPR003609 -
Lele14g0562 1012 SUPERFAMILY alpha-D-mannose-specific plant lectins 182 302 IPR036426 -
Lele14g0562 1012 Pfam PAN-like domain 471 529 IPR003609 -
Lele14g0562 1012 SMART blect_4 151 271 IPR001480 -
Lele14g0562 1012 Pfam S-locus glycoprotein domain 330 437 IPR000858 GO:0048544
Lele14g0562 1012 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 131 893 - -
Lele14g0562 1012 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 705 - -
Lele14g0562 1012 Pfam Protein tyrosine and serine/threonine kinase 631 900 IPR001245 GO:0004672|GO:0006468
Lele14g0562 1012 Pfam D-mannose binding lectin 192 297 IPR001480 -
Lele14g0562 1012 ProSiteProfiles PAN/Apple domain profile. 459 544 IPR003609 -
Lele14g0562 1012 MobiDBLite consensus disorder prediction 1 17 - -
Lele14g0562 1012 MobiDBLite consensus disorder prediction 1 45 - -
Lele14g0562 1012 SMART serkin_6 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0562 1012 CDD PAN_AP_plant 468 544 - -
Lele14g0562 1012 ProSiteProfiles Protein kinase domain profile. 630 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0562 1012 SUPERFAMILY Protein kinase-like (PK-like) 614 927 IPR011009 -
Lele14g0562 1012 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 141 268 - -
Lele14g0562 1012 Gene3D Phosphorylase Kinase; domain 1 587 705 - -
Lele14g0562 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Lele14g0562 1012 Gene3D - 140 268 IPR036426 -
Lele14g0562 1012 CDD STKc_IRAK 636 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0562 Lele-ChrLele14 17158246 17165250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0562 606 946 Receptor kinase-like Gene Family AT4G23140 53.977 7.92e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele14g0562 PK_Tyr_Ser-Thr 4.4e-47 CL0016