Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0555 ATGGGTGAGGAGGAAGTTTTGCCGGATCATCTGCGCTGCAAGCGCACCGACGGGCGCAAATGGCGGTGTAGCCGGAAAGTGATGGACAACGTGAAGCTTTGTGAGATTCACTATCTTCAAGGCCGCCATCGGCAATACAAGGAAAAGGTCCCGGAGTCGCTGAAGCTTCAGAGAAAGCGTAAGAAAGGGCTTAATAAGGACGAGTCTGTTCTCAACAATGCGGAAGTGAAGGCACGGAAAGTGGTCAAGATGGCGAAGATGATGAGAAAAAGGATAAAAGTGTCAGATGACTCGGAGGCAATGGAAGCTCCTGTGGGGAAGAAGGAGTCCAAGCAGGGTAATAAGCAGTTGGAGTTGATAAGGATGGTGCTGAAGAGAGAGGTTGAGAAAAGGAAGAAGAAGCAGGGAGAGAAGATGAAGAGAAAGAAGGAGGAGGAAGAGGAATTGCATTACGGTGAGGGAGAGTTAACAAAAGAATTGCCCAATGGTTTAATGGCAATTTCTAGGGCATCAACGGCCCAAGAATACTGCAATGTAGGTTCCCAATGTGATGTCAAATTATGTGTTGATCATAAGGCAATTACTCCACGTTACTTCAGGTCCAAGAATGTCGAGAGGCTGCCTGGGGGAAAGTTGCAGGTTTTACCGTATGGACGCAAGTGTAAGAGGAAGAAGTGTCATTGGTGTCAGAGAAGTGATTCTTGGAATCTCATAAAGTGTTCAAGCTGTCAAAAAGAGTTTTTCTGCATGGATTGCATTAAAGAACGGTATTTTGATACTCAAAATGAAGTTAAGATGGCATGTCCAGTTTGTCGAGGAACTTGCTCATGTAAAGACTGCTTGAGAAGTAAATGTAAAGACAACGAAACTAAGGAATTTTTGGCTGGTAGAAGCAAAGTTGATAGGATATTGCATTTTCATTATTTGATTTGCACGCTCCTTCCCATACTGAAACAAATAAATGAAGATCTCAATGCTGAGGTAGAAACAGAAGCTAAAATGAGAGGTAAAAGACCATCCGATATTCACATCAAGCAAGTTGAATTTTCCAGCAATGACCAGCCTTACTGCAATCAATGCAAAACACCCTTTTTGGATCTCCATAGAAGCTGTCCAAGTTGTTCCTATAGCCTTTGCATAACTTGTTGCAGGCAATTGTATCCAAGGAACTGCTCTGAAGAAAGTAATACATCTTTGATGGGATCTGATGGGATGGATGCCTGTCTTGCCAGCGAAAATCATCTTTTGGATAAGAAGGCCATCACCAACGGACATTCAGTAGCTACTTTTTCATTGCATATAAGCACAAACTCTGACAGTACTGGCAGTGTATCTTGTCCTACAAAAGAACTTGGTGGTTGTGGTGATAATATTCTTGAATTAAGATGTGTTTTTCCTTTAAGCTCGATCAAGGAGATGGAAGTAACAGCAGAAGAAATAGTTTGCAGCTACGACTTTCCTGAAACTTTGGACAAAAGTTTGAGCTGCTCATTGTGTCCAGACACGGTTAATAAACTTGATGGATTTCAGCAGTTACGAGAAGCAGCTCTTAGAGAAGATTCAAAAGACAATTGGTTGTTTTATCCCACTGTTTTGGAAATCGGTGATGATAACTTTGAACACTTTCAGAAGCACTGGGGAAAAGGCCATCCGGTAGTGGTGCGAGATGTGCTCCAAAATACATCAAACCTCAGTTGGGATCCACGGGTCATGTTCTGTACTTATCTTGAGGGTAGCATCTCAAGATATGAGAATGACAAGGATGAACTTGAAGCTTGTTTAGATTGGTGTGAGGTGGAAATTAACATTAGGCAGGGCTTTACTGGATCTCTTAAATGTCAGCCACATAAAAACATGTGCCATGAGATACTGAAATTGAAGTGGTTACTGTCTTCCCGAATATTCAAAGAATGGTTTCCAGCTCATTTTGAGGAAGTAATTGATGCTCTACCGCTTCAAGAATACATGAATCCTACATCTGGTTTTCTGAATTTAGCCATAAATACGGCCCAGGGGAGTGCAAAGCATGACCTAGGACCTTATATCTATCTTTCATATGGCTGTGGTGACGAACAGAGTGACTTTGTGACGAAACTGTCTTATGATTCATATGATGTGGTTAATATTATGGCTCACACCACGGATGCCCCTCTCTCTACACAACAGCTGGCTCAAATAAGGAAGCTGCTGAAAAAGCACCAAAGCCTGTGTCGTAGGGATTCTTCTGATATTAGTGCTGAACAATTAAAGGAACAGAGAGGGAAAGTAAATTCATTACTGCCTGCTGAAGACATTGAAAAGACCGGGTTGCATAGAAAGGAGAGAGAAGAAAAGCGTTTTTTCAGGAGAGTCAACAGAACAGCTTGCATTGCTACTGAAGCAACAGATGTAGCTTATCAGAGTATAGACGGCAAAATTTCCCAGGATGAAGAATGTGATTCCGATTCCGATTCTGAAAATCCCTATGGAAGTTCAAATAATAATAGAAATGAAAAGTTTATTAAACGTTCTGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTTCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGCTGAATTTTCTCCTTCCCATGACAGTCACAAGCAGGTGTATCATCCGCTTTTAGATCAGAGCTTCTTTCTTGACAACACTCACAAGATGAGGCTCAAGGAGGAATATAAAATTGAACCATGGACTTTTGAGCAATATGTCGGCGAAGCTGTCGTTATTCCTGCTGGATGTCCATACCAGATTAGAAATTCTAAGTGTTGTGTTCATGTAGTATTGGAATTTGTTTCCCCTGAGAATATCGCCGAGTGTATTCAATTGATCGATGAAGCACGTCAGCTTCCAGAAGACCACGAAGTAAAAGTTGACCATCTTGAGGTGAAGAAAATGGCTCTTCATAGCATGGATTCAGCAATAAAAGAGATCCGTGAACTAACCTCCAAAACGTGA 2967 0.4183 MGEEEVLPDHLRCKRTDGRKWRCSRKVMDNVKLCEIHYLQGRHRQYKEKVPESLKLQRKRKKGLNKDESVLNNAEVKARKVVKMAKMMRKRIKVSDDSEAMEAPVGKKESKQGNKQLELIRMVLKREVEKRKKKQGEKMKRKKEEEEELHYGEGELTKELPNGLMAISRASTAQEYCNVGSQCDVKLCVDHKAITPRYFRSKNVERLPGGKLQVLPYGRKCKRKKCHWCQRSDSWNLIKCSSCQKEFFCMDCIKERYFDTQNEVKMACPVCRGTCSCKDCLRSKCKDNETKEFLAGRSKVDRILHFHYLICTLLPILKQINEDLNAEVETEAKMRGKRPSDIHIKQVEFSSNDQPYCNQCKTPFLDLHRSCPSCSYSLCITCCRQLYPRNCSEESNTSLMGSDGMDACLASENHLLDKKAITNGHSVATFSLHISTNSDSTGSVSCPTKELGGCGDNILELRCVFPLSSIKEMEVTAEEIVCSYDFPETLDKSLSCSLCPDTVNKLDGFQQLREAALREDSKDNWLFYPTVLEIGDDNFEHFQKHWGKGHPVVVRDVLQNTSNLSWDPRVMFCTYLEGSISRYENDKDELEACLDWCEVEINIRQGFTGSLKCQPHKNMCHEILKLKWLLSSRIFKEWFPAHFEEVIDALPLQEYMNPTSGFLNLAINTAQGSAKHDLGPYIYLSYGCGDEQSDFVTKLSYDSYDVVNIMAHTTDAPLSTQQLAQIRKLLKKHQSLCRRDSSDISAEQLKEQRGKVNSLLPAEDIEKTGLHRKEREEKRFFRRVNRTACIATEATDVAYQSIDGKISQDEECDSDSDSENPYGSSNNNRNEKFIKRSGAQWDVFRRQDVPKLLEYLKRHSAEFSPSHDSHKQVYHPLLDQSFFLDNTHKMRLKEEYKIEPWTFEQYVGEAVVIPAGCPYQIRNSKCCVHVVLEFVSPENIAECIQLIDEARQLPEDHEVKVDHLEVKKMALHSMDSAIKEIRELTSKT 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0555 988 MobiDBLite consensus disorder prediction 93 112 - -
Lele14g0555 988 Gene3D Cupin 525 960 - -
Lele14g0555 988 Pfam JmjC domain, hydroxylase 838 932 IPR003347 -
Lele14g0555 988 MobiDBLite consensus disorder prediction 806 831 - -
Lele14g0555 988 SUPERFAMILY Clavaminate synthase-like 538 980 - -
Lele14g0555 988 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 987 IPR045109 GO:0032454|GO:0033169
Lele14g0555 988 Coils Coil 125 149 - -
Lele14g0555 988 SMART cupin_9 639 951 IPR003347 -
Lele14g0555 988 ProSiteProfiles JmjC domain profile. 654 951 IPR003347 -
Lele14g0555 988 ProSiteProfiles Zinc finger RING-type profile. 226 272 IPR001841 -
Lele14g0555 988 Pfam WRC 8 49 IPR014977 -
Lele14g0555 988 ProSiteProfiles WRC domain profile. 7 53 IPR014977 -
Lele14g0555 988 MobiDBLite consensus disorder prediction 129 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0555 Lele-ChrLele14 17113208 17120653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0555 8 97 GRF Transcription Factor Family AT4G37740 32.222 9.34e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele14g0555 JmjC 3.7e-09 CL0029