Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0529 ATGGAACCTGCACTGTCGGTATATGTTAATTATATTGTTTATTTCATGGTGCAGGCAGTTCACGTTGCTGCTCAACATGGACAAACAGCTTTCTTAAATCACATCATTGCAAAGTACAGTGCTGACTTTGATGCACCCGATAATGAGGGACGAAGTCCTCTTCATTGGGCTGCTTATAAGGGGTTTGCTGATACAACCCGATTGCTTTTATTCCGGGATGCATGCCAAGGGAGACAAGATAAAGATGTTTTAAAGGAGATGGTACTCAATAAAACTGGTATAGGTTGTACGCCGTTGCACTGGGCTGCAGTAAGAGGAAATGCAGAGGTATGCACTGTGCTTGTACACTCAGGCACAAAGAAAGAGCTGATGGTGAAGGACAATGCTGGATCCACTCCTGTACAGCTAGCACATGATAAAGGTCATCAGCATGTCGCCCTTTTCCTTTCTAAACAACAGAGAGCTCTGAGCAACCATTGGAGAGACAAAATTTGTAGTGGGAGGATGACAGGTTCTAGTTTTCAAAAGATTACTGCTGTTGTTGGTCTTTGGGCTTGGACAGCTCTTTCTCTGGCAGTTGGTAGCTTGATTATGTTCTATAGGTGCAGTAGTAAAGATCCTGGTTATATAAAACGACCAGGAGATTCAGGTGCTCATAGTGATGCAGAGGATCCTTTGTTGAATATTGACATGAACAGCTCCTCTGTTTGGACAGGAAATCGGTCTCAACTTTGCCCTACCTGCAAGATCATAAGAACTGTACGATCCAAGCATTGCCCCACTTGTAAGCGTTGTGTGGAACAGTTTGACCACCATTGCCCATGGATATCTAACTGTGTGGGAAAGGTCAGGAATTGTGGAATTTGGACATCATCAATTGGATTGTCAGAAGGAGAAACATGGATCCATCATATGTTAGTACAGCATCCTGGTCCTATTGCATTTCTGGTGCTGGACACTTTTATTTTCATTGCTGCTGTAACTTTGACGTCAACACAAGCTTCAATGATAGCTCGGAACATCACCACAAATGAAGTAGCAAACTCTACTAGATATGGGTATCTTCGTGGTCCTGATGGGAAGTTTAGAAATCCATACAACCTCGGCTGTTGGAAGAATTGTTCTGACTTATTTTTTCAGGGATATACAAGTCATGATGATATTGCTTGGCCTCCATTACAGCGGGTGGCGACGTAG 1197 0.4327 MEPALSVYVNYIVYFMVQAVHVAAQHGQTAFLNHIIAKYSADFDAPDNEGRSPLHWAAYKGFADTTRLLLFRDACQGRQDKDVLKEMVLNKTGIGCTPLHWAAVRGNAEVCTVLVHSGTKKELMVKDNAGSTPVQLAHDKGHQHVALFLSKQQRALSNHWRDKICSGRMTGSSFQKITAVVGLWAWTALSLAVGSLIMFYRCSSKDPGYIKRPGDSGAHSDAEDPLLNIDMNSSSVWTGNRSQLCPTCKIIRTVRSKHCPTCKRCVEQFDHHCPWISNCVGKVRNCGIWTSSIGLSEGETWIHHMLVQHPGPIAFLVLDTFIFIAAVTLTSTQASMIARNITTNEVANSTRYGYLRGPDGKFRNPYNLGCWKNCSDLFFQGYTSHDDIAWPPLQRVAT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0529 398 Pfam Ankyrin repeats (3 copies) 74 150 IPR002110 GO:0005515
Lele14g0529 398 ProSiteProfiles Ankyrin repeat profile. 94 126 IPR002110 GO:0005515
Lele14g0529 398 Pfam Ankyrin repeats (many copies) 18 70 IPR002110 GO:0005515
Lele14g0529 398 ProSiteProfiles DHHC domain profile. 243 281 - -
Lele14g0529 398 SUPERFAMILY Ankyrin repeat 18 150 IPR036770 -
Lele14g0529 398 Pfam DHHC palmitoyltransferase 240 282 IPR001594 GO:0016409
Lele14g0529 398 Gene3D - 6 197 IPR036770 -
Lele14g0529 398 ProSiteProfiles Ankyrin repeat profile. 49 81 IPR002110 GO:0005515
Lele14g0529 398 ProSiteProfiles Ankyrin repeat region circular profile. 49 70 - -
Lele14g0529 398 ProSiteProfiles Ankyrin repeat region circular profile. 94 118 - -
Lele14g0529 398 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 18 379 - -
Lele14g0529 398 SMART ANK_2a 15 45 IPR002110 GO:0005515
Lele14g0529 398 SMART ANK_2a 49 83 IPR002110 GO:0005515
Lele14g0529 398 SMART ANK_2a 94 123 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0529 Lele-ChrLele14 16924765 16932287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0529 199 281 Lipid Metabolism Gene Families AT4G22750 32.558 1.30e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0529 14 16924765 16932287 Lele13g0623 13 18422884 18424905 CCT
Lele14g0529 14 16924765 16932287 Lele14g0530 14 16936483 16938630 CCT
Lele14g0529 14 16924765 16932287 Lele15g1857 15 11352540 11355036 CCT
Lele14g0529 14 16924765 16932287 Lele16g1884 16 11273981 11276255 CCT
Lele14g0529 14 16924765 16932287 Lele15g1858 15 11359055 11377012 hybridization
Lele14g0529 14 16924765 16932287 Lele16g1885 16 11280829 11289146 hybridization