Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0510 ATGAAAGTTAATGATCGTTGTTTGCCTTGTGATTCCGGACTTTTTTTTGCAAAACTCAAAACTCAGAGGTCTCCTGTGCATTTTACCTTTGCTTTTTCAAATCTTCGCCTTTATGACAAGTCTTCAACATTGCAGGCTAATACAGCGTTGTGCAGCCTCAAATCAAACGAGAACACCTTATCTAACATAGCAAAAACTGAAGGAATGGCTGCAAATTACACAGAAGGAGGAGCATCTCCTCATATTTCTGCATCCAAGAGTTTTCAGAAAGAGAGGACTTTTGCCATATGCCAGATGACTACAACTTCCGAGGCTGAGTTGAATTTTCACTTGCATGGGAGGTTTCATAAGGCTGCTTGCGAATCACTGAAAGCAAAAAACGGATCTGTTGCTGTGGAAGTTTTCGTGAAGAAGAATGACAAGTTATGTAGAGGAGAACCAGAGAAGATGATCGATACTTTGAATTCATTAGAACAGAAGATCACCTGTCATCATCCAAAAATAGAGCAGAAGAATGTTGAAATTGTGAGTGTGCAAAAATATTATTATAGGCCAAAGAGGACTATAGAGCAGGAAAACACGAGCACAAGTGTTCCAGGCATTCCCAAGGTGCAGGAATTGCAGAAGAACTCTGGAAAATCAGTACTTGAAATGAACAACTTCAGATTCAGATATTTAGCTGATGACATTATTGAGCTGGCACCTGTTTTCCACTCGCCACCAATAGCAAACAGATTCGTCCTCATCAGCTCTGATCCAATATGGCTTCTTTCTGGTTCCTCACTCTCCTTCTTAAATGCGTCGACTATCTTTCATGGCCCGTGCTTGCTTTGGGTTATCCTCTGTAAGTCTCTCTCTCTCTCTGTGTTGCCTTTGAGTTATTATTATTTCAGTGATAGTGATGGTGTTTTGTTTTTTATGATGATGATGATGGTGTTTTGTGGTAAAAGATGTATTTCCATTGAAGCAATTGAGAATGATAACCATTCAGACACTCGGAATTTGATCTCTTATTGGATTCTTCTCTCACTGATATACCTCTTCGAGTATGCTTTTCTCGCGCTTCTTCAATGGTTTCAGTATTGGCATTACACGAAGCTAATGATCGTCGCCTTCCTTGTGATGCCGGACTTTGGGAGAGCTTCTTATGTCTATAATCACCTCATTCGATCATGCATCTACATGAATCCACAAACAGTCATAGGCAGATTCAGGAACTGGAACAAGATATTTGTCAAGAAAGAAGACTTTATAATGCAGGCTGAGAAGTACATAACACAGAATGGAACTGAAGCCTTAGAAAAACTCATTGCCAGCAAGAACACACAGCAAAGTGTTGTTCATGCAGAAACGAGAGAAGCAGATCCAACTGCAGAGAAGAATGAGATCCTGAAGACAAATGGAGGAAGGCTTCTCATGGAACAGAAAGACATCAGAGATTTGGAGATGATTGAAAAAGAGCAACTTCCTGAAGGCAAACAAGTTGATACGGCATTGGGCAGCCTAAAATCAAACGAAAGCACTTCTTCTGCCATGGCGGAAACCGAAAAAATGGCGGTAGACACAGAACGCGGAACATATCCTCAGGTTTCAGCATCTGAGAATGTACAGAAAGAGTGGACTTGTGCCATATGCCAATTGACAATGCCTTCTGAAGCTAATTTGAATTCCCACCTGCAAGGAAGAAGACACAAGGCTGCTTGCGAAGCACTGAACACGAAAAATAAAGCGACGACGGTGAAAGACACAGGAAGCGGGGCATCTGCTCAGGTTTCTGGATCTGAAAATGAACAACAGACAAAGTGGACTTGTGACATATGCCAACGGACATTTCCTTCTGAGGCTAATTTGAAGTCTCACATGTATGGCAAGAAGCATAAGGCTGCTTGCGAAGCTCTGGAGGCGAAAAACCAGCTTCTTGCTGAGATTTTTCTGAAGAAGGATGATAAGTCCATTGGAGGACAAGAGAAGACAATAAATACTCCATATGCAATACAGCAGAAGAACAGTTGCAGAGTAAGATGTGAGATGTGTAATGTAAATTGCTCTAGTGAAATTGCCTTGGCTTCTCACTTACAGGGTAAGAAGCACTTGGCTCAGAGTCAATTACTAAGTGGCCCGTTCTTGCTCTGGTTTATTCTGCAAGTCTCTCCCCACTCTCTCGCTCGCTATGTGTGTGTTTGGTATCAGTTATTGACTTCTGAAAATGTTCTTGCATTTGTTGGGATTATACTTAACAACCCTATAGTATATACCAAAAAATGCACCGAAGTTTTTCCTTCAGATCATTATTTCACTGATAGTTATGCTGCTGCTGCTGTTGTTGTTATGATGGTGAATGTTACTGTAGCCTTAGAGAAACTCATTGCTGGCAAGGCTAATATAGCGTTGTGCAGACTCAAATCAAACGAGAACACCTTATCTAACATGGCAAAAACTGAAGGAATGGCTGCAAAATACACAAAAGGAGGAGCATCTCCTCATATTTCTGCATCTAAGAGTTTTCAGAAAGAGAGGACTTTTGCCATATGCCAGATGACTACAACTTCCGAGGCTGATTTTGAATTTTCAATTGCATGGGAGAATGACAAGTTATGGAGAGGAGAACCAGAGAAGATGATCGATACTTTGAATTCATTAGAACAGAAGATCACCTATCATCATCCAAAAATAGAGCATAAGAATGTTGAAATTGTGAGTGTGCAGAAATATTATTATAGGCCAAAGAGGACTTTAGAGCGGGAAAACACGAGCACAAGTGTTCAAGGCATTCCCAAGGTGCAGGAATTGCAGAAGAACTCTGGAAAATCAGTACTTGAAATGAACAACTCCAGATTCAGATGTGATACGTGTGATATAAATTGCAGTAGTGAAGTTGACATGGCTTCTCACTTGAAGGGCAGGAGGCACTTGGTTCAAAATCAATTGGTCCTCTTTAGTAAATGA 2946 0.4087 MKVNDRCLPCDSGLFFAKLKTQRSPVHFTFAFSNLRLYDKSSTLQANTALCSLKSNENTLSNIAKTEGMAANYTEGGASPHISASKSFQKERTFAICQMTTTSEAELNFHLHGRFHKAACESLKAKNGSVAVEVFVKKNDKLCRGEPEKMIDTLNSLEQKITCHHPKIEQKNVEIVSVQKYYYRPKRTIEQENTSTSVPGIPKVQELQKNSGKSVLEMNNFRFRYLADDIIELAPVFHSPPIANRFVLISSDPIWLLSGSSLSFLNASTIFHGPCLLWVILCKSLSLSVLPLSYYYFSDSDGVLFFMMMMMVFCGKRCISIEAIENDNHSDTRNLISYWILLSLIYLFEYAFLALLQWFQYWHYTKLMIVAFLVMPDFGRASYVYNHLIRSCIYMNPQTVIGRFRNWNKIFVKKEDFIMQAEKYITQNGTEALEKLIASKNTQQSVVHAETREADPTAEKNEILKTNGGRLLMEQKDIRDLEMIEKEQLPEGKQVDTALGSLKSNESTSSAMAETEKMAVDTERGTYPQVSASENVQKEWTCAICQLTMPSEANLNSHLQGRRHKAACEALNTKNKATTVKDTGSGASAQVSGSENEQQTKWTCDICQRTFPSEANLKSHMYGKKHKAACEALEAKNQLLAEIFLKKDDKSIGGQEKTINTPYAIQQKNSCRVRCEMCNVNCSSEIALASHLQGKKHLAQSQLLSGPFLLWFILQVSPHSLARYVCVWYQLLTSENVLAFVGIILNNPIVYTKKCTEVFPSDHYFTDSYAAAAVVVMMVNVTVALEKLIAGKANIALCRLKSNENTLSNMAKTEGMAAKYTKGGASPHISASKSFQKERTFAICQMTTTSEADFEFSIAWENDKLWRGEPEKMIDTLNSLEQKITYHHPKIEHKNVEIVSVQKYYYRPKRTLERENTSTSVQGIPKVQELQKNSGKSVLEMNNSRFRCDTCDINCSSEVDMASHLKGRRHLVQNQLVLFSK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0510 981 ProSitePatterns Zinc finger C2H2 type domain signature. 948 970 IPR013087 -
Lele14g0510 981 SUPERFAMILY beta-beta-alpha zinc fingers 588 638 IPR036236 -
Lele14g0510 981 PANTHER OS06G0651300 PROTEIN-RELATED 573 704 - -
Lele14g0510 981 ProSitePatterns Zinc finger C2H2 type domain signature. 675 697 IPR013087 -
Lele14g0510 981 ProSitePatterns Zinc finger C2H2 type domain signature. 542 564 IPR013087 -
Lele14g0510 981 SMART ZnF_U1_5 670 704 IPR003604 GO:0003676|GO:0008270
Lele14g0510 981 SMART ZnF_U1_5 537 571 IPR003604 GO:0003676|GO:0008270
Lele14g0510 981 SMART ZnF_U1_5 90 123 IPR003604 GO:0003676|GO:0008270
Lele14g0510 981 SMART ZnF_U1_5 943 977 IPR003604 GO:0003676|GO:0008270
Lele14g0510 981 SMART ZnF_U1_5 599 633 IPR003604 GO:0003676|GO:0008270
Lele14g0510 981 ProSiteProfiles Zinc finger C2H2 type domain profile. 602 631 IPR013087 -
Lele14g0510 981 Pfam TB2/DP1, HVA22 family 320 391 IPR004345 -
Lele14g0510 981 Pfam Zinc-finger of C2H2 type 946 970 - -
Lele14g0510 981 Pfam Zinc-finger of C2H2 type 602 626 - -
Lele14g0510 981 Pfam Zinc-finger of C2H2 type 674 697 - -
Lele14g0510 981 Pfam Zinc-finger of C2H2 type 540 564 - -
Lele14g0510 981 Gene3D Classic Zinc Finger 516 570 - -
Lele14g0510 981 Gene3D Classic Zinc Finger 583 632 - -
Lele14g0510 981 Gene3D Classic Zinc Finger 926 975 - -
Lele14g0510 981 Gene3D Classic Zinc Finger 655 703 - -
Lele14g0510 981 ProSitePatterns Zinc finger C2H2 type domain signature. 604 626 IPR013087 -
Lele14g0510 981 SUPERFAMILY beta-beta-alpha zinc fingers 533 575 IPR036236 -
Lele14g0510 981 SUPERFAMILY beta-beta-alpha zinc fingers 935 973 IPR036236 -
Lele14g0510 981 SUPERFAMILY beta-beta-alpha zinc fingers 672 703 IPR036236 -
Lele14g0510 981 SMART c2h2final6 673 697 IPR013087 -
Lele14g0510 981 SMART c2h2final6 602 626 IPR013087 -
Lele14g0510 981 SMART c2h2final6 946 970 IPR013087 -
Lele14g0510 981 SMART c2h2final6 540 564 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0510 Lele-ChrLele14 16732919 16747783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0510 457 704 C2H2 Transcription Factor Family AT5G61190 25.681 2.98e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele14g0510 TB2_DP1_HVA22 1.3e-15 No_clan