Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0505 ATGAATACTCTTCTCAAAAATCTCAAAAACTTCAAAGCTTTCCACATTTTCCCATTTCTACCGTCTCACTTTGTACTTGGGACTATATCCTCCGGCGACATTGGACTGAGGCCACCACCTAAACTTCAATTTGAATCGCACATTTCTCTTCTGCTCCTCCTTCTCTTGCCTATTTCTCATATTCGTTTAGGGGTTTTCCTGATCTCAATCATGGCGGAAGACTCAATACCGCCTCCATCTTCGTCTTCCTCCTCTGCTCCTCTCGGCTCCTCCGTGATCTCTATAGTGAACAAACTCCAAGACATCTTCGCTCGGGTCGGGAGCCAGTCCACCATCGATCTTCCCCAAGTTGCCGTCGTCGGCAGCCAGAGTAGTGGCAAGTCCAGTGTCCTCGAGGCCCTTGTCGGCCGCGACTTCTTGCCTAGGGGTAATGATATTTGCACTAGGAGGCCCCTGGTGCTGCAGCTAGTGCAGACTAAGAAGAAGCCCGATGGCACTGAAGAGGAGTACGGGGAGTTCCTTCACTTGCCTGGCAAGAGGTTCTACGATTTCTCTGAGATTCGAAGGGAGATTCAGGCTGAAACTGACAAGGAAGCTGGAGGAAATAAAGGCGTCTCAGACAAACAGATACGTCTCAAGATTTTTTCACCAAATGTTCTTGATATTACACTTGTAGATCTACCTGGGATTACAAAGGTTCCTGTTGGAGACCAGCCTTCTGATATTGAAGCTCGAATCAGAACAATGATTATGTCATACATTAAAACTCCCACCTGTCTCATTCTCGCTGTCACACCAGCTAATTCAGATTTGGCCAACTCAGATGCTCTTCAAATGGCAGGAGTTGCTGATCCTGATGGCAACAGAACAATAGGAGTAATCACAAAGTTGGATATCATGGACAGAGGCACGGATGCCCGGAATCTATTACTTGGGAAAGTCATTCCCCTCCGACTTGGTTATGTGGGGGTTGTTAATCGTAGTCAGGAGGATATCCTAATGAACCGAAGTATAAAAGATGCTCTTATTGCTGAAGAGAAATTCTTTCGCAGTCGTCCTATATACAGTGGTCTAGCAGAGAGCTGCGGTGTTCCTCAGTTGGCAAAGAAATTAAATCAGATTCTAGCCCAGCATATAAAGGCCGTTCTCCCAGGGCTGAGAGCTCGTATAAGCTCTCAACTGGTTACTGTTGCAAAGGAGCATGCAAGCTATGGGGAAATCACGGAGTCCAAGGCTGGTCAGGGTGCTGTTCTCCTAAATATTCTTTCAAAATATTCTGAAGCATTTTCCTCCATGGTAGAGGGAAAGAATGAGGAGATGTCGACAACTGAATTATCTGGTGGAGCCAGAATTCATTATATTTTTCAGTCTATATTTGTGAAGAGTTTAGAGGAGGTGGATCCATGTGAGGACTTGACTGATGATGATATTCGAACTGCTATACAGAATGCAACTGGGCCTAGATCAGCATTATTTGTTCCAGAAGTACCATTTGAAGTCCTTGTGAGAAGGCAAATGGCTCGTCTATTAGATCCAAGCCTTCAGTGTGCGAGGTTTATATACGATGAGCTGATGAAGATTAGCCATCGCTGTATGGTCACTGAACTGCAGCGTTTCCCATTTTTGAGAAAGCGCATGGATGAAGTGATAGGGAACTTTCTACGAGAAGGTCTTGAACCCTCAGAGAATATGATTGGACACATTATAGAAATGGAGATGGACTACATAAACACTTCACACCCAAATTTTATTGGCGGAAGCAAGGCATTGGAGACTGCTGTGCAACAGACCAAGTCTTCCAGGGTTCCCCTGCAAATGCCCAGGTCAAAGGATGGTATGGAGTCTGATAAGGGATCGGCCTCTGAAAGAAGTATGAAGTCTCGGGGATTTATTGCAAGGCAAGTAAATGGAGTAGTTGCGGCTGATCAGGTTGTTCGTGCTGCATCAGAAGGTGAAAAAGTTGCAGCCTCTGGAAATACCAGTTCAACAAGCTGGGGGATCTCGTCTATTTTTGGTGGAGGTGATAGCCGTGTGTCTATAAAAGAGATCCCATCAAATAAACCGCATAATGAACCAGTTAACACTCATAGCATGGAACAATCGTTCTCTATGATCCATCTGAGAGAGCCACCTGCTGTCTTGAAGCCATCTGAGAGCAATTCAGAGACAGAAGCTGTTGAAATTGCCGTGACAAAGTTACTTTTGAAATCATACTATGACATTGTCAGAAAAAATGTTGAGGATTTGGTCCCCAAAGCTATTATGCACTTCTTGGTAAACAACACGAAGAGAGAGCTTCACAATGTTTTCATCAAAAAGCTTTACAGAGAAAACCTGTTTGAAGAGATGCTGCAAGAACCTGATGAGGTAGCAATTAAAAGAAAACGCTGTCGAGAATTGCTCCGAGCTTATCAACAGGCGTTCCGGGACTTGGATGAACTGCCACTGGAAGCAGAAACAGTTGAAAGAGGATATAGCCTGCCTGAATCAACTGGCTTGCCTAAAATTCATGGGTTGCCATCTTCATCTCTGTATTCTGCAAGCAGTTCTGGAGACTACTATGGAGCTTCCCCAAAGAACCCAAAGTCTAGAAAATCTTCACATTCTGGGGAGTTTCAATCACCATCACATGCCTTTTCAGATTCCAATGGAAGTGGAGGGCCTTTCACGTCAGGTTTCTATCCCACAGTCCACGATTGA 2700 0.4489 MNTLLKNLKNFKAFHIFPFLPSHFVLGTISSGDIGLRPPPKLQFESHISLLLLLLLPISHIRLGVFLISIMAEDSIPPPSSSSSSAPLGSSVISIVNKLQDIFARVGSQSTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQLVQTKKKPDGTEEEYGEFLHLPGKRFYDFSEIRREIQAETDKEAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIEARIRTMIMSYIKTPTCLILAVTPANSDLANSDALQMAGVADPDGNRTIGVITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDILMNRSIKDALIAEEKFFRSRPIYSGLAESCGVPQLAKKLNQILAQHIKAVLPGLRARISSQLVTVAKEHASYGEITESKAGQGAVLLNILSKYSEAFSSMVEGKNEEMSTTELSGGARIHYIFQSIFVKSLEEVDPCEDLTDDDIRTAIQNATGPRSALFVPEVPFEVLVRRQMARLLDPSLQCARFIYDELMKISHRCMVTELQRFPFLRKRMDEVIGNFLREGLEPSENMIGHIIEMEMDYINTSHPNFIGGSKALETAVQQTKSSRVPLQMPRSKDGMESDKGSASERSMKSRGFIARQVNGVVAADQVVRAASEGEKVAASGNTSSTSWGISSIFGGGDSRVSIKEIPSNKPHNEPVNTHSMEQSFSMIHLREPPAVLKPSESNSETEAVEIAVTKLLLKSYYDIVRKNVEDLVPKAIMHFLVNNTKRELHNVFIKKLYRENLFEEMLQEPDEVAIKRKRCRELLRAYQQAFRDLDELPLEAETVERGYSLPESTGLPKIHGLPSSSLYSASSSGDYYGASPKNPKSRKSSHSGEFQSPSHAFSDSNGSGGPFTSGFYPTVHD 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0505 899 MobiDBLite consensus disorder prediction 850 899 - -
Lele14g0505 899 Gene3D Dynamin, middle domain 690 794 - -
Lele14g0505 899 Gene3D Dynamin, middle domain 414 614 - -
Lele14g0505 899 Pfam Dynamin central region 305 590 IPR000375 -
Lele14g0505 899 PRINTS Dynamin signature 266 284 IPR022812 -
Lele14g0505 899 PRINTS Dynamin signature 308 327 IPR022812 -
Lele14g0505 899 PRINTS Dynamin signature 114 132 IPR022812 -
Lele14g0505 899 PRINTS Dynamin signature 285 301 IPR022812 -
Lele14g0505 899 PRINTS Dynamin signature 139 156 IPR022812 -
Lele14g0505 899 PRINTS Dynamin signature 216 233 IPR022812 -
Lele14g0505 899 MobiDBLite consensus disorder prediction 850 890 - -
Lele14g0505 899 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 392 IPR027417 -
Lele14g0505 899 MobiDBLite consensus disorder prediction 597 625 - -
Lele14g0505 899 PANTHER DYNAMIN 91 813 IPR022812 -
Lele14g0505 899 FunFam dynamin-related protein 3A 90 393 - -
Lele14g0505 899 CDD DLP_1 112 384 IPR001401 GO:0003924|GO:0005525
Lele14g0505 899 FunFam Dynamin-related protein 3A 674 794 - -
Lele14g0505 899 Pfam Dynamin family 117 296 IPR045063 -
Lele14g0505 899 SMART dynamin_3 89 336 IPR001401 GO:0003924|GO:0005525
Lele14g0505 899 Pfam Dynamin GTPase effector domain 724 813 IPR003130 GO:0003924|GO:0005525
Lele14g0505 899 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 111 384 IPR030381 GO:0005525
Lele14g0505 899 FunFam Dynamin-related protein 3A 415 625 - -
Lele14g0505 899 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 140 149 IPR019762 -
Lele14g0505 899 ProSiteProfiles GED domain profile. 728 819 IPR020850 -
Lele14g0505 899 SMART GED_2 723 814 IPR003130 GO:0003924|GO:0005525
Lele14g0505 899 Gene3D - 90 394 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0505 Lele-ChrLele14 16685274 16695851 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1909 16 11510398 11516930 Lele14g0505 14 16685274 16695851 CCT
Lele13g0606 13 18227245 18230488 Lele14g0505 14 16685274 16695851 CCT
Lele14g0504 14 16676205 16679776 Lele14g0505 14 16685274 16695851 CCT
Lele15g1877 15 11551364 11554537 Lele14g0505 14 16685274 16695851 CCT
Lele14g0505 14 16685274 16695851 Lele14g0507 14 16705571 16710812 CCT
Lele14g0505 14 16685274 16695851 Lele16g1904 16 11480703 11483657 CCT
Lele16g1897 16 11420719 11433316 Lele14g0505 14 16685274 16695851 CCT
Lele14g0505 14 16685274 16695851 Lele15g1875 15 11534931 11542975 hybridization
Lele14g0505 14 16685274 16695851 Lele16g1906 16 11491901 11502057 hybridization