Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0488 ATGGACGTCGGCGACGATATCAACGATCCAAGTTACTGGGAAAAGCCTAAGGCGAGTTTTCTCATACGTAATCACTCAGACCAGCTCCGTTGCATTGCATCTTCTCCAGATTCCAAGCTTCATTACCCTCTCTTCGTCGATTTCGCAGAGTTGATGGATGATGACCCTCACCTTGCCCACCTCATCTTCACCAAACCCGCTACTTATTTACAAATATTTGACCAGGCTGCTGTTTGGGCTCATAAAATCATATTGGGAGATTTGGGAGGAGACAAGAAATGGGTCGATAAAAAGGCAATTCATGTCCGCATCAATACATGTGGCTCTCCACTTGAATGCCCAGAGTCTTTTCCGAGCATTGGACGTATTAGAGTGAAGCACCGGGGGATTCTTCTAACTTCGAAAGGGACAGTAATCAGGTCAGGAGCAATAAAGATGCATGAAGGAGAGAGGGAATACATGTGCCTAAAGTGCAAGAAGAGCTTCCTAGTTTATCCAGAGGTGGAAGCACGAAACTCCATAACGCTCCCTTCAATTTGCCAAGTTCGGGGGTCTAAGCCCTGTGGAGGAACAAAATTCCAGTATTTAGATAATACTATAGTATGCCATGATTATCAAGAGATTAAAATCCAAGAAAGCACACAGGTTCTTGGTGTTGGGGTGATTCCTCGTTCAATTCTTGTCATCTTAAAGGATGACCTTGTTGACATTGTCAAAGCTGGAGATGATGTAATTGTTACTGGGGTGTTAACGGCCAAATGGTCATCAGAAGTCAAAGATGTGCGCTGTGACCTTGATCCTGTTCTAATAGCCAACCATATAAGGAGAACGAATGAACTGAAGTCAGAAATTGATATTGCTGATGATCTCGTTATGAAGTTCAAACAATTCTGGATCCATTTTAAGGATTGTCCTTTGAAAGGGAGAAATGCAATTTTAGGAGGAATTTGCCCACAAGTATTTGGACTCTTCACTGTCAAGCTGGCAGTTGCATTAACACTTATTGGAGGTGTGCAACACGTCCATGCTTCTGGAACGAAGGTACGAGGGGAGCCCCACTTACTCTTGGTCGGTGATCCTGGCACAGGGAAATCTCAATTTTTGAAATTTGCAGCAAAATTGAGCAATAGATCTGTAGTTACCACTGGCATGGGAAGCACCAGTGCTGGACTGACTGTTACTGCAGTGAAGGATGGAGGAGAATGGATGTTGGAAGCTGGAGCCCTTGTTCTGGCAGATGGTGGGTTGTGTTGCATAGATGAATTTGATAGTATGAGGGAACATGACAGAGCAACCATACATGAAGCCATGGAGCAGCAGACCATAAGTGTTGCCAAGGCTGGTCTTGTAACAACACTCAGCACTAGAACAACAGTGTTTGGTGCTACCAACCCCAAGGGACATTATGATCCCGATCAACCTCTTTCTGTCAACACAACACTCTCTGGTCCTTTATTAAGCAGGTTTGATATAGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGCGGTTGTTTCAACTCATATCCTTAGCGAGGCAGAATCATATAAAACGAGGCAAGATGAAGAAGATCTAGCAAATATCTGGCCTCTTTCTACGCTCAAGAGGTATATTCACTACGTTAAAGAAACCTTCAAACCAGTCCTTACAAAAGAGGCTGAGACAGTCATCTCCAGTTACTATCAACTGCAAAGGAAATGTGGAACTCATAATGCAGCTAGGACAACTGTTCGCATGCTGGAAAGCTTGGTTCGCTTAGCCCAAGCCCATGCAAGGTTGATGTTCAGAAATGAGGTGACTCGATTAGATGCCATCACTGCCATTTTATGCATAGAATCTTCAATGACTACCTCTGCTATAGTGGATTGCATTGGTAATGCTCTACATTCCAATTTTACCGAAAACCCTGACGAGGAATATAACAAACAGGAGAGGATGATACTAGAAAAATTGGGAATTGATGAATCCTCTGACATTAACATCATAGAAGGCTGA 2001 0.4348 MDVGDDINDPSYWEKPKASFLIRNHSDQLRCIASSPDSKLHYPLFVDFAELMDDDPHLAHLIFTKPATYLQIFDQAAVWAHKIILGDLGGDKKWVDKKAIHVRINTCGSPLECPESFPSIGRIRVKHRGILLTSKGTVIRSGAIKMHEGEREYMCLKCKKSFLVYPEVEARNSITLPSICQVRGSKPCGGTKFQYLDNTIVCHDYQEIKIQESTQVLGVGVIPRSILVILKDDLVDIVKAGDDVIVTGVLTAKWSSEVKDVRCDLDPVLIANHIRRTNELKSEIDIADDLVMKFKQFWIHFKDCPLKGRNAILGGICPQVFGLFTVKLAVALTLIGGVQHVHASGTKVRGEPHLLLVGDPGTGKSQFLKFAAKLSNRSVVTTGMGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGHYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSTHILSEAESYKTRQDEEDLANIWPLSTLKRYIHYVKETFKPVLTKEAETVISSYYQLQRKCGTHNAARTTVRMLESLVRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFTENPDEEYNKQERMILEKLGIDESSDINIIEG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0488 666 ProSiteProfiles MCM family domain profile. 308 511 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 43 650 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 Pfam MCM OB domain 122 251 IPR033762 -
Lele14g0488 666 SUPERFAMILY Nucleic acid-binding proteins 41 259 IPR012340 -
Lele14g0488 666 Pfam MCM AAA-lid domain 535 616 IPR041562 -
Lele14g0488 666 SMART AAA_5 350 499 IPR003593 -
Lele14g0488 666 Gene3D - 122 252 IPR012340 -
Lele14g0488 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 435 448 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 349 364 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 485 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 PRINTS Mini-chromosome maintenance (MCM) protein family signature 407 421 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 Gene3D - 147 203 - -
Lele14g0488 666 SMART mcm 116 618 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 Pfam MCM P-loop domain 311 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lele14g0488 666 CDD MCM9 311 616 - -
Lele14g0488 666 FunFam Probable DNA helicase MCM9 286 621 - -
Lele14g0488 666 Gene3D - 300 622 IPR027417 -
Lele14g0488 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 627 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0488 Lele-ChrLele14 16546271 16553658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0488 20 641 Core DNA Replication Machinery Family AT2G14050 75.520 0.0 982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0488 14 16546271 16553658 Lele15g1894 15 11669664 11677866 hybridization
Lele14g0488 14 16546271 16553658 Lele16g1927 16 11631090 11638634 hybridization