Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0483 ATGTTGCTAGACAATCGGCCATGCAATGAATTGGTCAAAGACGAGAAGAACTGGTCAAAAGCCTTTTTACTTGTCCCTGTGCCTGCAGCAGCGAGACTTGGTTATTGGGTAGACTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCGTGTGGAACAGTGAACAGAGTCACCATTCGTACTGACAAGTTTGGCCAACCCAAGGGTTATGCTTATGTGGAGTTCATTGAGGTAGAGGCTGTTCAGGAGGCAGTTCTGCTGAACGAAACTGAACTACACGGGCGTCAGTTGAAGGTAACAGCCAAGAGGACCAACATACCCGGGATGAAGCAGTATCGTCCCCGCCGGCCCAATCCTTCTATGGGGTTTCGAGGCAGAACCCCATATGCACCTCCTTTTGCCTATTCTCCATATGGATATGGGAAGGTTCTAAGGTTCAGAATGCCAATGCGTTATAGCCCATACTATTGA 477 0.4801 MLLDNRPCNELVKDEKNWSKAFLLVPVPAAARLGYWVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFIEVEAVQEAVLLNETELHGRQLKVTAKRTNIPGMKQYRPRRPNPSMGFRGRTPYAPPFAYSPYGYGKVLRFRMPMRYSPYY 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0483 158 Gene3D - 36 110 IPR012677 -
Lele14g0483 158 SUPERFAMILY RNA-binding domain, RBD 38 128 IPR035979 GO:0003676
Lele14g0483 158 CDD RRM_II_PABPs 37 102 - -
Lele14g0483 158 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 100 IPR000504 GO:0003723
Lele14g0483 158 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 37 119 - -
Lele14g0483 158 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 106 IPR000504 GO:0003723
Lele14g0483 158 SMART rrm1_1 37 102 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0483 Lele-ChrLele14 16497732 16499319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0483 37 101 Eukaryotic Initiation Factors Gene Family AT2G36660 33.333 6.90e-06 43.1