Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0480 ATGGCTTGGAGAGGCATTTTGGGTTTCGATTACGGCATAGTTCAGGCTCCTTTGGGCCCCGATATCTCTGGTCCCCATCTTGTCGCCGCCGTTGCCAACGCCGGTGCTCTCGGACTTCTCAGAGCCCCTGATTGGGAATCGCCAGATTACTTGAGAGAGCTCATAAGGAAGACTAGGACCTTAACTGACAAACCGTTTGGGATTGGTGTTGTTCTGGCATTTCCCCATGAGGAGAACTTGAAGGTCATTTTGGAAGAAAAAGTGGCAGTCTTGCAAGTTTATTGGGGTGAATGTTCAAGGGAATTGGTAACTCAGGTTCATTCAGCTGGGGTCAAGCTTGTTCCCCAAGTTGGGAGAGTTGAAGAAGCAAAGAAGGCAATTGAAGCAGGTGTGGATGGAATAATTGTACAAGGAAGGGAAGCTGGGGGTCATGTTATTGGTCAGGAATCTTTAATAGCATTGGTGCCTCGGGTGGTTGATCTTGTTGGAGACAGAGACATACCTGTTATTGCCGCTGGAGGAATTGTGGATGCACGAGGATATGTTGCTGCTCTGGCACTTGGTGCTCAAGGCATCTGTCTAGGAACTAGGTTTGTAGCTACTGAGGAAAGCTATGCTCACCCTACATACAAGAGGAAACTGGTTGAGCTCGATGAAACTGAGTACACAGATGTATTTGGCCGGGCAAGATGGCCGGGCGCACCTCAGCGTGTGCTGGTGACACCTTTCTTCAATGATTGGAGATCCCTTCCACCCCATGAAAATGAAACCAATCAGCCCGTCATCGGTCATTCAAAGATTAATGGATTGGAGAAAGAGATTCGACGATTCGCCGGAACGGTGCCGAACATGTCAACTACAGGGGACCTAGAGAGCATGGCGATGTATGCAGGGCAAGGTGTTGGTCTCATAAAGGAAATTCTCCCTGCCGCTCAAGTTGTAAGGAGCCTGGTTGAAGGTGCTCAGCTTCTGATCCAACAAAACCTCAAGTAG 993 0.4904 MAWRGILGFDYGIVQAPLGPDISGPHLVAAVANAGALGLLRAPDWESPDYLRELIRKTRTLTDKPFGIGVVLAFPHEENLKVILEEKVAVLQVYWGECSRELVTQVHSAGVKLVPQVGRVEEAKKAIEAGVDGIIVQGREAGGHVIGQESLIALVPRVVDLVGDRDIPVIAAGGIVDARGYVAALALGAQGICLGTRFVATEESYAHPTYKRKLVELDETEYTDVFGRARWPGAPQRVLVTPFFNDWRSLPPHENETNQPVIGHSKINGLEKEIRRFAGTVPNMSTTGDLESMAMYAGQGVGLIKEILPAAQVVRSLVEGAQLLIQQNLK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0480 330 CDD NPD_like 10 234 IPR004136 GO:0018580
Lele14g0480 330 Pfam Nitronate monooxygenase 77 319 IPR004136 GO:0018580
Lele14g0480 330 Pfam Nitronate monooxygenase 6 73 IPR004136 GO:0018580
Lele14g0480 330 PANTHER 2-NITROPROPANE DIOXYGENASE 2 328 - -
Lele14g0480 330 Gene3D Aldolase class I 4 330 IPR013785 -
Lele14g0480 330 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 5 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0480 Lele-ChrLele14 16464300 16468580 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0480 14 16464300 16468580 Lele13g0567 13 17859346 17870802 CCT
Lele14g0480 14 16464300 16468580 Lele14g0470 14 16327244 16337673 CCT
Lele14g0480 14 16464300 16468580 Lele15g1917 15 11903105 11913865 CCT
Lele14g0480 14 16464300 16468580 Lele16g1945 16 11808042 11818298 CCT
Lele14g0480 14 16464300 16468580 Lele15g1905 15 11757378 11759039 hybridization
Lele14g0480 14 16464300 16468580 Lele16g1933 16 11697689 11703449 hybridization