Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0475 ATGGCCACAGTCGCCACCCCCGCTCCATCGTCAGCTCCGCCGCCACAAGCCCTAAAATTGGAGTCCCTTGCACGCATTGACACCACCACTCTCTCCCAGTCCGAGCTCCAAGCGCTCTCTCTCTGCTCACTCTCCGCCTTCGACCTCCGCTCGACCACCAACCTCGTTTTCCCCCATGTCGATCGTTCACTCTTCAATGAGAGCGCTGGCTCTCGCCGCCAGACCTACTCTCGACCACGCAAACCCCTTTCCCCTTCTGACTCCCCAACCGGCCGCCGCCGCCGCGTCGCTGGTCTTCTTCCAACTCCAAAGCCCCCACCTGTCCCCGATGATGACCCGGAAAACTTAGAGAACCGCAAGGTTATAGATTATTTGAAGCAATTGATTAGGGAAGACCCTAAATTCGATCAAGTTGAGCTACTCCCACCTTCTGTTACCCATGAAGTTGTGCCGGATTTGAAATTACGGGTCGGGATGAAGGAGAGCGAGGATATGGGGCTGGTGAGGAAGAGGAAGAGGGGGAGGAAGCCCAAAGTGAAGGTGCATTTGAAGGAGTGCTATAGAGAGATGGAGATTGTGAATAAGGGTGGTGTTGCCATTGATCTTTCTGCTTTGGCGAATACAGAGGATCCATTTGCTGAGGAGTTGAGCAGAAGAACTGAGGGGTTGCAGAGTGAAGAAGAGCTATTGGGGATTTTGAGGGATTTCGGGGGACAATGGGGAAGTAGGAGGAAGAAGAGGAAGATTGTGGATGCCGGAGATTTCGGCGATGTACTGCCGGTTGGTTGGAAGCTTCTACTGGGTTTGAAGAGAAAAGATGGTCGCGCGTGGATTTATTGCCGCAGATACATCAGTCCTAGTGGAGACCAATTTGTATCTTGCAAAGAAGTTTCTTCATATCTTCAGTCCCTTTTTGGTCACAATGATGCTCAGTTACCAATCAATCATAGGGGTGAAAATATGCTGACGGACAATGTGCAAATACATGACCTATTTGAATGTCACAAATGTAGCATGACATTTGGTGAGAAGGATTCATACTTGCAGCACCTTTTGTCTTTCCACCAAAGGGCAACAAGGCGCTATCGACTTGGTTCTTCTGTTGGAGATGGAGTTATAATCAAAGATGGGAAATTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTTGAAAGGCGTCGCTACAATGGACATGTGGGGATCCATGTTAGGAACTATGTGAGGAAAGTTGAAGAATCACCAGATCAGGTAAATGTTAAAAGGAGAGATAAGTCTCCAATCAAGGAGGATTTGCCTTCAAGGATCTCTAAGATGGATGCTCTAATTGAAATTGCTCAAAACTCTATTTTGGAGAATTCTGCAATTGAAACCCTTGGTAATCATGCTTCCTCTCCTGACAAACTGAATGTAATTTCTACTACAGAAATTCCTGTTGGTAACTTAGATCAGGACAAAATTTTTGAGTCTTCTCTCAGTGAACAGTATATGGAAGATAGCTTCAATTACAAAAACGTGGATCACAGTTTGAATCCCCAAGGTAGTAAACTTGCAGTCATAGATGAAGTAGAGAAAACTGATGGGGGCAACAAAGTTATAGATTCTAAGATGGAAACCTGTGAGGATCACTTTGTTTTGTCAACTGTGAACGAGCAAAATGTTGATGCATTTGAGAAGTCAAAGATAAAAGATGATGCGGGATTGACTTTTGATGGTTTGGATCGGCCCAGGGTTGATTTGGAATGTGTTTCACAAAGCCCTTTACTTCCTTCATCTGGCAATGATACAACCCCTGAAGTTGAAAAGAATCGAAATTCGGGCACTATTCTTGTGGAGCAACTTAACCATGATGAAGATAGTAAAATTATGAATGAGTTCAAAGTTGAATTAGATGACACAAAAGATGTATCTGTTATGCCTAAAATCCCAGAGACAACATTGCCAACTGCTGAAGAGAATACAGTGTCAGCTGAGGCTCCAACCCCATCTATGTCCATGATGCCAACAGTTTTGGCAAACAACACACAGATGGAAGAAGGGGCTTGTGCTTCCTCAGTTCAGGCTGAATCTCAAGAAGCAGGAAGACATAAGAAGATTAGAACATCATGTATATGGTGGGGTATAGTCTTTGATTATGATGCTGCTGATTCTGAAGTTCAACCAGATTCTGTTGGATTCATGTGCGCGGCTTGATACAACGTTTCTCTACATATACAACATCTTCTTGCAGCCTCCATGTCAAGCCATAAGGAGAAAACTAAGCAACAAACACTTGGAGCTATGCTGAAATACAAGAAGTACAGAAAGCCAAATAATGGGGAGGCACAAATCACCTGCAGGGGGTGCAGGGGAGAGTTTTATGTGCCCTCATCCACAACCACATACCGTTGCCCTCTTTGCAAAACAATCAACAATGGGCCATCAAATAAAGATAGTGGCAATGGAATGGGGCTGCTGAAATTTGCTGCTGCTAAGAATATCGTCAAAACTGACGATATGTTACAGAATGGTAGCAAAAGTGATTATGTTCTGAATCAAAGGCCTTCATCTTCTTCTTTGATTCGCTCTTCCTTATCATCCCGACGAAGCAATAAGCGCGCGGTTCTCTGTGGAGTTACTTACAGGAAAAGGAGGTACAGACTCAAAGGAACCACTAATGATGTTGCTAATATGAGGGAGCTTCTGGTTAAGGTTTTTGACTTTCCTACTGAATGCATACATGAGCTCACAGAAGAGAAAAAGAGTCCAGATTTAGTTCCAACGAAGAAAAACGTACTGCAACAATTGAATTGGCTTGTGGAAGGCTGCCAATCAGGAGACTCACTGGTGTTTTACTTCTCAGGACATGGCATTCAACACACAGATTCCAAAGAAGATGAGATAGATGGGATGGACGAAAGCATTTGTCCGGTCGATTTCTTGGAAGAAGGCACGATTCTCGATGACGATATAAACTCCATGCTTGTTTGGCAACTCAAAGATGGTGTAACACTTCATGCCATTGTTGATGCTTGTCATAGTGGAACAATTCTTGATCTATCATATGTCTATGACCCTCTAAAATGCATATGGAAAGATAACAGGCCTACTTCCAAAGAACCTTCTAGAAAGGATCCGAACGGTGGGCGGGCAATTTGCATTAGTGCTTGTAAAGATCATCAGATGGCTGCTGATACCTCGGCTTTCCGTGGGAAGGGAATGAATGGTGTAATGACCTATCTTTTCACAAAAGTCATCAGACAACATCCTGACATAACATACAAGGGTTTACTGGAACAGATTGGGAAGGAAATTGAAGAGATTATCAGAAATGGTTGTCGTCCATCTTTTTTGCATCGTCGCAAAATTGTGCAGCATTTTCAGGATCTTGTTATTTCATCATCTCAAGAGTTCGATGTTTCTAGGGCTATATTCACATTATGA 3417 0.4396 MATVATPAPSSAPPPQALKLESLARIDTTTLSQSELQALSLCSLSAFDLRSTTNLVFPHVDRSLFNESAGSRRQTYSRPRKPLSPSDSPTGRRRRVAGLLPTPKPPPVPDDDPENLENRKVIDYLKQLIREDPKFDQVELLPPSVTHEVVPDLKLRVGMKESEDMGLVRKRKRGRKPKVKVHLKECYREMEIVNKGGVAIDLSALANTEDPFAEELSRRTEGLQSEEELLGILRDFGGQWGSRRKKRKIVDAGDFGDVLPVGWKLLLGLKRKDGRAWIYCRRYISPSGDQFVSCKEVSSYLQSLFGHNDAQLPINHRGENMLTDNVQIHDLFECHKCSMTFGEKDSYLQHLLSFHQRATRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPDQVNVKRRDKSPIKEDLPSRISKMDALIEIAQNSILENSAIETLGNHASSPDKLNVISTTEIPVGNLDQDKIFESSLSEQYMEDSFNYKNVDHSLNPQGSKLAVIDEVEKTDGGNKVIDSKMETCEDHFVLSTVNEQNVDAFEKSKIKDDAGLTFDGLDRPRVDLECVSQSPLLPSSGNDTTPEVEKNRNSGTILVEQLNHDEDSKIMNEFKVELDDTKDVSVMPKIPETTLPTAEENTVSAEAPTPSMSMMPTVLANNTQMEEGACASSVQAESQEAGRHKKIRTSCIWWGIVFDYDAADSEVQPDSVGFMCAAXYNVSLHIQHLLAASMSSHKEKTKQQTLGAMLKYKKYRKPNNGEAQITCRGCRGEFYVPSSTTTYRCPLCKTINNGPSNKDSGNGMGLLKFAAAKNIVKTDDMLQNGSKSDYVLNQRPSSSSLIRSSLSSRRSNKRAVLCGVTYRKRRYRLKGTTNDVANMRELLVKVFDFPTECIHELTEEKKSPDLVPTKKNVLQQLNWLVEGCQSGDSLVFYFSGHGIQHTDSKEDEIDGMDESICPVDFLEEGTILDDDINSMLVWQLKDGVTLHAIVDACHSGTILDLSYVYDPLKCIWKDNRPTSKEPSRKDPNGGRAICISACKDHQMAADTSAFRGKGMNGVMTYLFTKVIRQHPDITYKGLLEQIGKEIEEIIRNGCRPSFLHRRKIVQHFQDLVISSSQEFDVSRAIFTL 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0475 1138 SUPERFAMILY DNA-binding domain 257 304 IPR016177 GO:0003677
Lele14g0475 1138 ProSiteProfiles Zinc finger C2H2 type domain profile. 332 360 IPR013087 -
Lele14g0475 1138 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 320 IPR037472 -
Lele14g0475 1138 Pfam Caspase domain 863 1097 - -
Lele14g0475 1138 ProSiteProfiles Zinc finger C2H2 type domain profile. 379 406 IPR013087 -
Lele14g0475 1138 Gene3D - 816 1136 - -
Lele14g0475 1138 MobiDBLite consensus disorder prediction 68 84 - -
Lele14g0475 1138 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 249 321 IPR001739 GO:0003677
Lele14g0475 1138 ProSitePatterns Zinc finger C2H2 type domain signature. 334 355 IPR013087 -
Lele14g0475 1138 ProSitePatterns Zinc finger C2H2 type domain signature. 381 401 IPR013087 -
Lele14g0475 1138 SUPERFAMILY Caspase-like 866 1097 IPR029030 -
Lele14g0475 1138 SMART c2h2final6 379 401 IPR013087 -
Lele14g0475 1138 SMART c2h2final6 332 355 IPR013087 -
Lele14g0475 1138 MobiDBLite consensus disorder prediction 68 117 - -
Lele14g0475 1138 Gene3D Classic Zinc Finger 301 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0475 Lele-ChrLele14 16369780 16378502 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele14g0475 Peptidase_C14 2.1e-41 CL0093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0583 13 18053617 18058717 Lele14g0475 14 16369780 16378502 CCT
Lele14g0475 14 16369780 16378502 Lele15g1913 15 11875892 11878254 hybridization
Lele14g0475 14 16369780 16378502 Lele16g1940 16 11772540 11777349 hybridization