Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0470 ATGGCGGAGCGTGATTCTTACGGCGGGCTGGGTTCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGATGGTTGCGGCCTGCTGAAATTTGTGAAATCCTTCGTAATTATCAGAGGTTTCATATCACATCAGAACCTCCAAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTATTGAGGTATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCTCATGGTGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACAGGATATGATGCACATTGTTTTCGTCCACTACTTGGAAGTTAAGGGTCATAGGACAAGTGTTGGAGTAAAACCTGATATTCATGAGGTTTCATCAGATTCTCAAAGAGGCAGCTCTGCATCATCTGGTTTTTCGAGAACTTATAATACTGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACTAGCACTTTGACATCCCTATGTGAAGATGCTGACTCTGGGTATCATGCGCAGTCATTGATTTCTGGAGCAGACCACATTTCACAAGTTCAGCGAGATAAGCATAGAGGCAGTGATGCTAGTACTTCTTTCATTGATGCCCAAAAAACAAATGGAATGGCCTTACGGGACAAAGGCTTTGAACAATGTACAAATGGATTATCTGCTGATCCATCCCTTGTATCATTTACTTCCATCCCATCCAATTCAATAGGAAATATTCTTGAACCAGAAAATACTGTTCCGGGTGAACTTTTAGCCATAAACAATGTCCTTATTGGGACAGCTGGGAGTTCTCAATCCCTCCAATCAAATTGGCAGATCCCTTTTGAAAGTAATCCAGAAAATATGTCCAAAGAGCTTGCAGCCCAATCGCTGGGTTTGGAATTTGGATCTGATTTTACCAATGGCATGCGGGGGCATGAAATACATAATCATGTTGCTTCTAGCCCGGTAACTTTTAACTGTCAGCAAAAAGAGGAGACTGTGCTGGAAAACTTTCCAGAACAGTATACAGATACTCAATCTCAAATTTTGCTGAAATACAATTATGGGAATGAAGCTCCCACAGAAGAAAGTATTAATTATGCCTTGACTGTGAAGCGATCCTTATTAGATGGGGAGGAAAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATTACTAAAGAACTTGAAGAGGTGGATGATCTTCATATGCAGTCATCACCTGGCATTTCTTGGAGCGCTGATGAATGTGGGCATGTGATAGATGATTCCTCATTGAGCCCCTCCATCTCTCAGGACCAGCTGTTCAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATCGGAAACAGAGGTTTTGATTATTGGAACATTTTTGAAGAGTCAAACAGAGGTAGCGAATTGTAACTGGTCGTGCATGTTTGGGGAAGTTGAGGTTCCTGCCGAGGTTCTAGCCAGTGGAATCTTGTGCTGTCAGGCTCCACCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTACACGGAGAGCTTCGCTGAAAATGTTGACGTTTCGGATTTCTATAACAGTTCAACTGAGATGCAGCTTCATCTGATACTAGAGAAGCTACTTTATTCAAAATCAGCGCTCCCTTCTTATTACAGCTTTGACAATGATATGGTGAAAAGAAACTTAATGTTTAAGCTCATCACGCTTAAAGAGGAAGAGGCGTTTGCAGACAGGGAAGAGCTGATGTCAGAAAACAATGCGTCCCAGCAAACGGTGAAGGAGTTAATATTTTACAGGCAAGTTAAAGAGAAGCTGTACTCTTGGCTGCTTCGCAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAAGCGTGCTTCATTTAGCGGCTGCTCTTGGTTATGAGTGGGCAATAATGCCAATCGTTACTGCTGGTGTAAATATCAATTTTCGCGACGTGAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGAAGGGAACGGACAGTGGCTGTACTTGTCTCCATGGGTGCAGCTGCTGGAGCATTGACAGATCCGTCCCCAACGTTTCCCTCTGGTAGAACAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCAGAATCTTCATTAACCAGCCACCTTTCAACCCTCACAATGAATGATCAGAAGGGAGATGTTGGGCAAAAAGTTTCAGAAGTAGAAGAAGTACAGACAGTTTCAAAACGAACTGCAACACCAGGGTTTAGCGGTGATATGCCAGATGCCCTCTGCCTTAAGGATTCCCTTACTGCTGTTCGTAATGCTACACAGGCGGCTGATCGTATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTGACTCAGTTTGAAGATGATGAGTTTGGATTGTCAGATCAACAAGCTCTTTCCCTTATAGCTTCTAAGGCATGCAAGGCTGGATATGGAGATGCTTTAGCCCATACTGCTGCTGTACAAATACAGAAAAAATTTCGTGGCTGGAAGAAAAGAAAAGAATTTCTCATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGCAGAATAAATCAGTCCTCTGGTCTGTTGGAATTTTGGAGAAGGTAATATTGCGATGGAGACGCAAGGGCAGTGGTCTACGTGGCTTCCGATCAGATGCTAATAAAATCCCCGACCAAGAAAATGACACTGTGAAAGAGGATGATTTCGATGTTCTCAAGGAAGGGAGGAAACAAAGTGAAGAAAGGTTCCAAAAGGCACTTTCAAGGGTGAAATCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTTTGTTAAATGTTGTCGAGGACTTCCGCCGAACCAAGGCATGCGATATGGATGTGATCAATTCAGAAGAGACAGTGGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTAGATGATGACAATTTCATACCCATAGCATTTTGA 3141 0.4292 MAERDSYGGLGSRLDIQQLQFEAQHRWLRPAEICEILRNYQRFHITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKGHRTSVGVKPDIHEVSSDSQRGSSASSGFSRTYNTVPSGSTDSMSPTSTLTSLCEDADSGYHAQSLISGADHISQVQRDKHRGSDASTSFIDAQKTNGMALRDKGFEQCTNGLSADPSLVSFTSIPSNSIGNILEPENTVPGELLAINNVLIGTAGSSQSLQSNWQIPFESNPENMSKELAAQSLGLEFGSDFTNGMRGHEIHNHVASSPVTFNCQQKEETVLENFPEQYTDTQSQILLKYNYGNEAPTEESINYALTVKRSLLDGEESLKKVDSFSRWITKELEEVDDLHMQSSPGISWSADECGHVIDDSSLSPSISQDQLFSINDFSPNWAYAESETEVLIIGTFLKSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYTESFAENVDVSDFYNSSTEMQLHLILEKLLYSKSALPSYYSFDNDMVKRNLMFKLITLKEEEAFADREELMSENNASQQTVKELIFYRQVKEKLYSWLLRKVIEDGKGPNVLDEEGQSVLHLAAALGYEWAIMPIVTAGVNINFRDVNGWTALHWAASYGRERTVAVLVSMGAAAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMNDQKGDVGQKVSEVEEVQTVSKRTATPGFSGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEDDEFGLSDQQALSLIASKACKAGYGDALAHTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQNKSVLWSVGILEKVILRWRRKGSGLRGFRSDANKIPDQENDTVKEDDFDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRRTKACDMDVINSEETVDGVEDLIDINMLLDDDNFIPIAF 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0470 1046 MobiDBLite consensus disorder prediction 154 186 - -
Lele14g0470 1046 ProSiteProfiles Ankyrin repeat profile. 696 728 IPR002110 GO:0005515
Lele14g0470 1046 SMART CG_1_2 19 137 IPR005559 GO:0003677
Lele14g0470 1046 SUPERFAMILY E set domains 463 548 IPR014756 -
Lele14g0470 1046 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Lele14g0470 1046 Gene3D - 872 918 - -
Lele14g0470 1046 Pfam IQ calmodulin-binding motif 874 892 IPR000048 GO:0005515
Lele14g0470 1046 Pfam IQ calmodulin-binding motif 897 914 IPR000048 GO:0005515
Lele14g0470 1046 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Lele14g0470 1046 SUPERFAMILY Ankyrin repeat 646 757 IPR036770 -
Lele14g0470 1046 SMART ANK_2a 696 725 IPR002110 GO:0005515
Lele14g0470 1046 SMART ANK_2a 663 692 IPR002110 GO:0005515
Lele14g0470 1046 SMART ANK_2a 735 764 IPR002110 GO:0005515
Lele14g0470 1046 Gene3D Immunoglobulins 456 552 IPR013783 -
Lele14g0470 1046 FunFam Calmodulin-binding transcription activator 2 456 552 - -
Lele14g0470 1046 Pfam IPT/TIG domain 463 541 IPR002909 -
Lele14g0470 1046 ProSiteProfiles Ankyrin repeat region circular profile. 663 694 - -
Lele14g0470 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 921 IPR027417 -
Lele14g0470 1046 ProSiteProfiles IQ motif profile. 895 919 IPR000048 GO:0005515
Lele14g0470 1046 ProSiteProfiles IQ motif profile. 872 901 IPR000048 GO:0005515
Lele14g0470 1046 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Lele14g0470 1046 FunFam Calmodulin-binding transcription activator 2 871 919 - -
Lele14g0470 1046 SMART iq_5 894 916 IPR000048 GO:0005515
Lele14g0470 1046 SMART iq_5 871 893 IPR000048 GO:0005515
Lele14g0470 1046 MobiDBLite consensus disorder prediction 149 186 - -
Lele14g0470 1046 Pfam Ankyrin repeats (3 copies) 646 721 IPR002110 GO:0005515
Lele14g0470 1046 Gene3D - 622 768 IPR036770 -
Lele14g0470 1046 ProSiteProfiles Ankyrin repeat region circular profile. 696 721 - -
Lele14g0470 1046 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0470 Lele-ChrLele14 16327244 16337673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0470 1 1028 CAMTA Transcription Factor Family AT5G64220 51.399 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele14g0470 CG-1 4.2e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0480 14 16464300 16468580 Lele14g0470 14 16327244 16337673 CCT
Lele15g1905 15 11757378 11759039 Lele14g0470 14 16327244 16337673 CCT
Lele16g1933 16 11697689 11703449 Lele14g0470 14 16327244 16337673 CCT
Lele14g0470 14 16327244 16337673 Lele15g1917 15 11903105 11913865 hybridization
Lele14g0470 14 16327244 16337673 Lele16g1945 16 11808042 11818298 hybridization