Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0468 ATGGATTCCACGCCTATGGCGCTCTTCAGAGCTCTGAATCGCCATTTCTGCAGAGCTCCTTCGAGTCAATGCATTCCCACGGTTCTTCTCCATCAAAGGCTTAAATGGCTTTCTCATAACCATGCTATACGCAACTCCAGCTCTTTTGCTTCTTCTTCCCCCTCTCTCAGGAGCTTGTGTGCGATGGTCACCCGACTACCCTGTCGTTTCCAGTGTGTTTCGAGTTCCGCTGCACCGTTTTCTTCTTCTGGCGCGGGAAATGGCGGGCTTGGAGGGGTGAGTGGCGGCGGCGGCGGCGGTGATAGAGATGGTGGCGCCGGGGGTGATTCTGGAGATGCTAATCTCAAATTGGTCAGTGATGGTGGTAAAGAACTTTCGGCACTTTCACCTGATGTTATTATTCTTGATGTTGCGGGAATGGTGTGTGGGGGATGTGCGGCTAATGTGAAAAGAATTCTAGAAAGTCGACCTCAAGTGTCATCTGCTACTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAACTGTACCAAATTGGCAAAAGCAATTAGGAGAGGCACTTGCAGAGCATTTGACTAGCTGTGGCTTCAAGTCTAGCCTTCGAGATTCAGCAAGAGACAGTTTCCTCCAAGTTTTTGAAAGGAAGATGGAGGAAAAACACAGACAGTTGAAAGAAAGTGGGCGAGAGCTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCCTTGTTGGCCATCTCTCTCATTTCCTTGGAGCGAAGGCACCTTGGATCCATGCATTTCATTCCACTGGCTTTCACCTATCCCTGTCTTTCTTTACATTGGTTGGTCCAGGGCGTCAACTTATTCTTGATGGCATAAGAAGCCTTCTTAAAAAGGCACCAAACATGAACACATTGGTTGGTCTTGGGTCTTTGTCATCATTTGCTGTCAGCCTATTTGCTGTCTTGCTGCCCAAATTGGGTTGGAAGGCCTTCTTTGAGGAACCAATTATGCTAATCGCATTTGTCTTGTTAGGAAGGAATCTGGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTTTGAGTATATTGCCATCAAAGGCTCGCCTTCTGGTTAGCAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCGAATTCTTGTGCTTCCTGGAGATCGTATTCCAGCAGATGGAATTGTCAGAACTGGCAGGAGCACTGTAGATGAGTCCAGTTTTACTGGAGAGCCTCTGCCAGCAACAAAACTACCTGGGAGTCAGGTTGCTGCTGGGAGTATAAATCTAAATGGCACTCTTACAATTGAAGTGCAGAGACCAGGCAGTGAGACTGCCATGGGAGACATCGTTCGTCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTAATGGCAGCTTCTGCCGCCACATTTACATTCTGGAGTCTGTTTGGCAGACGCATTCTACCTGCTGCTCTTTATCAAGGAAGTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCGTGTGCCCTTGGGTTGGCCACACCTACAGCTGTGCTGGTTGGAACTTCTTTGGGAGCTACAAGAGGATTACTTTTACGGGGTGGAAACATTCTGGAGAAGTTTTCAATGGTAGATGCTGTTGTATTTGACAAAACAGGGACCTTGACGATTGGTAGACCAGTTGTGACAAAGATTGTCGATGCAAGTGGACAAAACAAAAACTTAAGGCAAACTGCTGACAATGATTGGTCAGATGTTGAAGTTCTGAGATTAGCTGCTGGAGTAGAATCAAATACAGTACACCCAATTGGTAAAGCAATTGTAGAGGCTGCTCAGGCAATTAATTGTCATAATGCAAAGGCAGCAGATGGAACATTTTTGGAAGAACCTGGGTCTGGTGCAGTATCAATTATTAATAACAATAAGGTTTCAGTTGGGACTTTGGAATGGCTCATCAGGCAGGGAGTTAACAAAAATATTCATCAAGAAGTTGAGGACTATAGAAATCAGTCTGTTGTTTATGTGGGAGTAAATGATACTGTAGCTGGCCTTATATATTTTGAAGACCAGATAAGGGAAGATGCTAAACATGTTGTTGAAGCTTTGTCTAAACAAGGAATTGGTGTTTATATGCTCTCGGGAGACAAAAGGAGTACGGCTGAGTATGTTGCATCTGTTGTTGGAATTCCTAGAGAGAAGGTGTTATCTGGAGTGAAGCCAGATGACAAAAAGAAGTTTATCAATGAACTCCAGAAAGATCAGAAATTTGTTGCTATGGTGGGCGATGGGATCAATGATGCAGCTGCCTTGGCTTCTTCACATATTGGTATTGCATTAGGTGGAGGTGTTGGAGCTGCTAGTGAGGTGTCCTCTATTGTACTGATGGGCAACAGGCTCTCACAGCTGCTTGATGCATTGGATCTTAGCAGGCTTACCATGAAGACTGTGAAACAAAATCTTGGGTGGGCTTTCCTATACAACATTGTTGGAATTCCAATTGCAGCTGGATTTTTACTTCCAGTAAGTGGGACCATGTTGACTCCGTCAATTGCAGGTGCTCTCATGGGCTTGAGTTCCATTGGGGTAATGACAAACTCATTGCTTCTAAGATACAGATTTTCCGCAAAGCAAAAACAAATCCATGGCGCATCCCCGATGATCGAAACCCATGTAGACAGTGATCTTGCCCAGAAAGAGAAATTAAAATATGGACAGTGA 2817 0.4515 MDSTPMALFRALNRHFCRAPSSQCIPTVLLHQRLKWLSHNHAIRNSSSFASSSPSLRSLCAMVTRLPCRFQCVSSSAAPFSSSGAGNGGLGGVSGGGGGGDRDGGAGGDSGDANLKLVSDGGKELSALSPDVIILDVAGMVCGGCAANVKRILESRPQVSSATVNLTTETAIVWPVSEAKTVPNWQKQLGEALAEHLTSCGFKSSLRDSARDSFLQVFERKMEEKHRQLKESGRELAVSWALCAVCLVGHLSHFLGAKAPWIHAFHSTGFHLSLSFFTLVGPGRQLILDGIRSLLKKAPNMNTLVGLGSLSSFAVSLFAVLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDTKEFDSSVEVPSDSLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGSQVAAGSINLNGTLTIEVQRPGSETAMGDIVRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLFGRRILPAALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVDAVVFDKTGTLTIGRPVVTKIVDASGQNKNLRQTADNDWSDVEVLRLAAGVESNTVHPIGKAIVEAAQAINCHNAKAADGTFLEEPGSGAVSIINNNKVSVGTLEWLIRQGVNKNIHQEVEDYRNQSVVYVGVNDTVAGLIYFEDQIREDAKHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGIPREKVLSGVKPDDKKKFINELQKDQKFVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMGNRLSQLLDALDLSRLTMKTVKQNLGWAFLYNIVGIPIAAGFLLPVSGTMLTPSIAGALMGLSSIGVMTNSLLLRYRFSAKQKQIHGASPMIETHVDSDLAQKEKLKYGQ 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0468 938 FunFam Copper-transporting ATPase PAA1, chloroplastic 131 206 - -
Lele14g0468 938 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
Lele14g0468 938 PRINTS P-type cation-transporting ATPase superfamily signature 716 727 - -
Lele14g0468 938 PRINTS P-type cation-transporting ATPase superfamily signature 793 812 - -
Lele14g0468 938 PRINTS P-type cation-transporting ATPase superfamily signature 738 748 - -
Lele14g0468 938 PRINTS P-type cation-transporting ATPase superfamily signature 581 595 - -
Lele14g0468 938 PRINTS P-type cation-transporting ATPase superfamily signature 816 828 - -
Lele14g0468 938 Coils Coil 215 235 - -
Lele14g0468 938 FunFam Copper-transporting ATPase PAA1 chloroplastic 592 724 - -
Lele14g0468 938 CDD P-type_ATPase_Cu-like 234 903 - -
Lele14g0468 938 ProSiteProfiles Heavy-metal-associated domain profile. 132 206 IPR006121 GO:0046872
Lele14g0468 938 ProSitePatterns Heavy-metal-associated domain. 137 166 IPR017969 GO:0046872
Lele14g0468 938 ProSitePatterns E1-E2 ATPases phosphorylation site. 583 589 IPR018303 -
Lele14g0468 938 Gene3D - 592 724 IPR023299 GO:0000166
Lele14g0468 938 SUPERFAMILY Calcium ATPase, transduction domain A 383 470 IPR008250 -
Lele14g0468 938 CDD HMA 135 205 IPR006121 GO:0046872
Lele14g0468 938 Gene3D - 572 843 IPR023214 -
Lele14g0468 938 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 383 602 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele14g0468 938 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 626 872 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele14g0468 938 Pfam haloacid dehalogenase-like hydrolase 577 805 - -
Lele14g0468 938 Pfam E1-E2 ATPase 366 559 - -
Lele14g0468 938 SUPERFAMILY HMA, heavy metal-associated domain 133 182 IPR036163 GO:0046872
Lele14g0468 938 FunFam Copper-transporting ATPase 1, putative 352 474 - -
Lele14g0468 938 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 283 903 - -
Lele14g0468 938 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 301 902 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele14g0468 938 SFLD p-type atpase 564 843 IPR044492 -
Lele14g0468 938 PANTHER ATP7, ISOFORM B 129 904 - -
Lele14g0468 938 FunFam Copper-transporting ATPase PAA1 chloroplastic 709 860 - -
Lele14g0468 938 Gene3D - 132 209 - -
Lele14g0468 938 SFLD C1.7: P-type atpase like 564 843 - -
Lele14g0468 938 Pfam Heavy-metal-associated domain 135 203 IPR006121 GO:0046872
Lele14g0468 938 Gene3D - 351 474 - -
Lele14g0468 938 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 613 726 IPR023299 GO:0000166
Lele14g0468 938 SUPERFAMILY HAD-like 580 899 IPR036412 -
Lele14g0468 938 SUPERFAMILY Calcium ATPase, transmembrane domain M 333 872 IPR023298 -
Lele14g0468 938 MobiDBLite consensus disorder prediction 91 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0468 Lele-ChrLele14 16285871 16307290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0468 292 903 Primary Pumps ATPases AT1G63440 38.193 8.27e-117 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0468 14 16285871 16307290 Lele15g1919 15 11925578 11942015 hybridization
Lele14g0468 14 16285871 16307290 Lele16g1947 16 11832190 11857405 hybridization