Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0454 ATGGCAGGTGCTGCAACATCTGGTGCTGTGTTGAATGGTTTGGGATCTTCCTTCTTGTGTGGAGGAAAGAGAAGCCAATCTCTTTTCTCTGCTAAATCTAATAATAATAATGCTGTTAGCCCTAAGAGGTTCTTTGTTGCTGCTGCTGCTGCTGCTCAACCCAAGAAATCTTGGATCCCTGCTGTTAAAGGTGGTGGCAACTTCATCAACCCTGAATGGCTAGATGGCTCGCTGCCAGGTGACTATGGCTTTGACCCTCTTGGCCTAGGCAAGGATCCAGCATTCCTCAAATGGTACAGAGAAGCAGAGCTCATCCATGGCCGGTGGGCGATGGCCGCGGTGGTCGGAATCTTTGTTGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCCGGAGCTGACCCGAATGCCATTGCTCCTTTCTCCTTTGGCTCACTTCTGGGCACCCAGTTGCTGCTGATGGGGTGGGTAGAGAGCAAGAGGTGGGTGGACTTCTTCAATCCTGATTCACAATCAGTGGAGTGGGCTACACCATGGTCAAGAACCGCCGAGAACTTCGCCAACGCCACCGGCGAACAGGGCTACCCTGGAGGCAAATTCTTTGACCCATTAGGGTTTGCAGGCAAAATCCAAGATGGGGTTTACATTCCTGACGGAGAAAAGCTGGAAAGACTCAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTCATCTTCTACTTTGAAGCTGGACAAGGCAAAACACCCCTTGGTGCTCTCGGCTTGTAA 780 0.5103 MAGAATSGAVLNGLGSSFLCGGKRSQSLFSAKSNNNNAVSPKRFFVAAAAAAQPKKSWIPAVKGGGNFINPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGKIQDGVYIPDGEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0454 259 SUPERFAMILY Chlorophyll a-b binding protein 68 259 - -
Lele14g0454 259 FunFam Chlorophyll a-b binding protein, chloroplastic 71 258 - -
Lele14g0454 259 Gene3D Chlorophyll a/b binding protein domain 71 258 - -
Lele14g0454 259 Pfam Chlorophyll A-B binding protein 71 247 IPR022796 -
Lele14g0454 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 43 257 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0454 Lele-ChrLele14 16202813 16204093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0454 5 259 Chloroplast and Mitochondria Gene Families AT1G15820 82.353 6.60e-154 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1964 16 11976261 11979432 Lele14g0454 14 16202813 16204093 CCT
Lele13g0567 13 17859346 17870802 Lele14g0454 14 16202813 16204093 CCT
Lele14g0454 14 16202813 16204093 Lele14g0454 14 16202813 16204093 ECH
Lele14g0454 14 16202813 16204093 Lele15g1931 15 12027440 12028672 hybridization
Lele14g0454 14 16202813 16204093 Lele16g1961 16 11936236 11939630 hybridization