Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0452 ATGAGTCTGAAGAGCAATAACATGAAAATGAGGAGGGGTTTCATGTGCCACTCTCAGGCATCAACTTCGGTGTGCATGAGCACCGGTGACCGTCGGTCGGTGGTAGTGCCTAGAAGGCCTGACAGAAGCATTTTTCTTGATGATACCAGACTCATCAGCAATCCCAAGTACTCCAGACTTGCTGAGCCTCGCAGATTCGAGCCTGTTGATAAGAAAGCATTGTCTATTGCTGTGCCAAAGATCAAGCAGAAGAGGGAGCGAGGTCAAGATCAAGAAAAGGAACCAAGGGCATTTCATCAAACACCTACTGATCAAGTTTTTCAGGTGGTTGTGATGAAGGTGGCACTTCATTGTCAAGGTTGTGCTGGCAAAGTTAAAAAGCATCTCTCTAAAATGGAAGGGGTGACATCATTCAGCATAGATTTGGAGACGAAGAGGGTGACAGTGATGGGGCACATATCTCCTGTGGGGGTGCTTGAGAGCATCTCCAAGGTCAAAAGGGCCGAGTTCTGGCCTTGCTGA 522 0.4789 MSLKSNNMKMRRGFMCHSQASTSVCMSTGDRRSVVVPRRPDRSIFLDDTRLISNPKYSRLAEPRRFEPVDKKALSIAVPKIKQKRERGQDQEKEPRAFHQTPTDQVFQVVVMKVALHCQGCAGKVKKHLSKMEGVTSFSIDLETKRVTVMGHISPVGVLESISKVKRAEFWPC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0452 173 MobiDBLite consensus disorder prediction 77 100 - -
Lele14g0452 173 CDD HMA 106 164 IPR006121 GO:0046872
Lele14g0452 173 MobiDBLite consensus disorder prediction 77 99 - -
Lele14g0452 173 Pfam Heavy-metal-associated domain 111 164 IPR006121 GO:0046872
Lele14g0452 173 PANTHER OS08G0405700 PROTEIN 14 173 IPR044526 -
Lele14g0452 173 ProSiteProfiles Heavy-metal-associated domain profile. 108 165 IPR006121 GO:0046872
Lele14g0452 173 SUPERFAMILY HMA, heavy metal-associated domain 106 166 IPR036163 GO:0046872
Lele14g0452 173 Gene3D - 106 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0452 Lele-ChrLele14 16170478 16173019 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0452 14 16170478 16173019 Lele16g1962 16 11945799 11947685 CCT
Lele14g0462 14 16228851 16239601 Lele14g0452 14 16170478 16173019 CCT
Lele15g1925 15 11990080 11997317 Lele14g0452 14 16170478 16173019 CCT
Lele16g1954 16 11904595 11912661 Lele14g0452 14 16170478 16173019 CCT
Lele14g0452 14 16170478 16173019 Lele14g0452 14 16170478 16173019 ECH
Lele14g0452 14 16170478 16173019 Lele15g1935 15 12079212 12081567 hybridization
Lele14g0452 14 16170478 16173019 Lele16g1964 16 11976261 11979432 hybridization