LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele14g0449	ATGGTCATTATGGAATCTAGTGATCTTTCAAATAACCAGCTAGTAGGAGAAATCCCGTCCAATGGTTCATTTCTAGCGTTTACTGACCTCAGTTTTAAAGGTAATACTCGTTTGAAACCACTAAACATTACACCTGGACCAATTTCACCAACGCCGCCGCCATCTTCAGCCAATAGTGCTACTAGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCAGCCCCTGCAATTGCACTTGCTTATTGCCGGAAGAGGAGACAGCAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTGCACCTTGGTCAGCTTAAAAAGTTTCCCCTGCGCGAGCTGCAAGTTGCAACTGACAGCTTTAGTAACAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTACAAAGGACGGTTAACTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAGGGTGGAGAGCTGCAATTTCAAACAGAAATAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACCCACTGAACGGTTGCTTGTATATCCTTACATGGCTAATGGTAGTGTGGCATCGTGTTTACGAGACCGCCCGGATACAAATCCCCCACTTGAATGGCCTATACGGAAGCGAATCGCACTGGGAGCTGCAAGGGGGCTTGCTTATTTACATGATCATTGTGATCCAAAGATCATTCACCGTGATGTTAAAGCTGCCAATATATTATTGGATGAGGAATATGAAGCAGTTGTTGGGGACTTCGGCTTGGCAAAACTCATGGATTACAAAGATACTCATGTTACCACTGCTGTGCGTGGTACAATCGGGCACATTGCACCAGAATACCTCTCCACAGGAAAGTCATCGGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTCGATCTTGCTCGACTTGCCAACAATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAACACTAGTGGATGGTGATTTGCAGGGTGAATATAATGAAGAGGAGGTAGAGCAACTAATCCAAGTGGCCCTGCTCTGCACACAAAGCTCGGCTATGGAAAGACCAAAAATGTCTGATGTGGTAAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAATGGGATCAATGGCAGAAAGACGAGATGTATAGGCGAGATAATCAAACCCTTCTCCCTAATCCTAATTGGCCGATTGTCGACTCAGCTTCACATATCCCCCCAGATGAACTGTCAGGTCCCAGATGA	1350	0.4519	MVIMESSDLSNNQLVGEIPSNGSFLAFTDLSFKGNTRLKPLNITPGPISPTPPPSSANSATRAIAGGVAAAAALMFAAPAIALAYCRKRRQQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDSFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEIEMISLAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRDRPDTNPPLEWPIRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANNDDVMLLDWVKGLLKDKRLETLVDGDLQGEYNEEEVEQLIQVALLCTQSSAMERPKMSDVVRMLEGDGLAEKWDQWQKDEMYRRDNQTLLPNPNWPIVDSASHIPPDELSGPR	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele14g0449	449	MobiDBLite	consensus disorder prediction	430	449	-	-
	Lele14g0449	449	ProSitePatterns	Protein kinases ATP-binding region signature.	132	154	IPR017441	GO:0005524
	Lele14g0449	449	Gene3D	Phosphorylase Kinase; domain 1	95	202	-	-
	Lele14g0449	449	FunFam	Somatic embryogenesis receptor kinase 1	95	202	-	-
	Lele14g0449	449	FunFam	Somatic embryogenesis receptor-like kinase 1	203	420	-	-
	Lele14g0449	449	Gene3D	Transferase(Phosphotransferase) domain 1	203	420	-	-
	Lele14g0449	449	Pfam	Protein kinase domain	127	396	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g0449	449	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	249	261	IPR008271	GO:0004672\|GO:0006468
	Lele14g0449	449	ProSiteProfiles	Protein kinase domain profile.	126	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g0449	449	SUPERFAMILY	Protein kinase-like (PK-like)	106	401	IPR011009	-
	Lele14g0449	449	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	8	410	-	-
	Lele14g0449	449	SMART	serkin_6	126	400	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele14g0449	Lele-ChrLele14	16133061	16135713	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele14g0449	1	449	Receptor kinase-like Gene Family	AT4G33430	78.414	0.0	682

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Lele14g0449		Pkinase	7.4e-45	CL0016