Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0435 ATGATGTCTGAGAATGTGATATTGAATCGCTTACTCTTTTCCTCCCATAAAGGTCATTATTGTGCAAGGACTAGCAAAATGGACAGAAGTGTTGGAATTGTGATTGATGAGTCGAGCATCATGAAAGCAGTTGAACCGTTGCCAGAGGATTTTGATCCAACGGCTGTGATTAAGGATCCTGTACCACCCATAGTTGGAAATAATGGAAATGGTCATGCGGTGAATAAGATGACTAAGGATAGAAGTGAAAGAGAGATAGTACTTGGCAGGAATGTTCATACCACATGCTTGGAAGTCACAGAACCAGATGCTGATGATGAGGTGACAGGGGACAGGGAAGCTTATATGGCAAGTGTTTTGGCTAGATACAGGAAATCTCTGATGGAAAGGACGAAGCATCATTTAGGTTATCCCTATAATTTGAATTTCGACTATGGTGCCCTTGCCCAGCTGCAGCACTTTTCTATAAACAACTTGGGAGATCCATTTATTGAAAGTAACTATGGCGTCCACTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCCGATTATGGGAGATTGAGAAAAATGAGTACTGGGGCTATATTACAAACTGTGGCACAGAAGGGAATCTACATGGCATTCTTGTTGGGAGAGAGGTTTTCCCAGATGGGATTCTGTATACCTCAAGGGAAACACATTATTCTATTTTCAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAAGTTGACACACACTGTACTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGATTATTCGTAACAAAGACAAGCCAGCAATTGTAAATGTGAATATAGGCACAACTGTCAAAGGAGCTGTGGATGATCTTGATCTAGTAATAAAGACACTTGAAGAAGCAGGATTTTCGCACGACCGATTCTACATCCACTGTGATGGAGCTTTGTTTGGTCTGATGATGCCTTTTGTCAAACTCGCTCCTAAAGTCTCCTTTAAGAAGCCTATAGGCAGTGTGAGTGTATCTGGCCACAAATTTGTGGGGTGCCCTATGCCTTGTGGTGTGCAGATAACAAGATTGGAGCACGTCAATGTTCTCTCCAGGAATGTGGAGTACCTAGCTTCTAGGGATGCCACAATCATGGGCAGTCGAAACGGACACGCTCCCATCTTCCTCTGGTACACCCTAAACCGAAAGGGATACCGAGGTTTCCAGAAAGAAGTACAGAAATGCTTGAGGAATGCACATTACTTGAAAGACCGCCTCAGGGACGCGGGGATTGGGGCAATGCTTAATGAGCTGAGCAGCACAGTTGTGTTTGAGCGGCCACACGATGAGGAGTTTACACGCAGGTGGCAACTAGCATGCCAAGGCAACATTGCTCATGTTGTGGTGATGCCAAACATTACAATCGAGAAGCTCGACGATTTTCTAGAGGAGCTTGTTCAGAAACGGGCCAAGTGGTTTGAAGATGGCAGGTGTCAGCCCCGCTGCATTGCGTCTGATGTGGGTGAAAAGAGTTGCCTCTGTGCCTTGCACAAGTGA 1536 0.4479 MMSENVILNRLLFSSHKGHYCARTSKMDRSVGIVIDESSIMKAVEPLPEDFDPTAVIKDPVPPIVGNNGNGHAVNKMTKDRSEREIVLGRNVHTTCLEVTEPDADDEVTGDREAYMASVLARYRKSLMERTKHHLGYPYNLNFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYTSRETHYSIFKAARMYRMECVKVDTHCTGEIDCDDFKAKIIRNKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEEAGFSHDRFYIHCDGALFGLMMPFVKLAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHVNVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRDAGIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDDFLEELVQKRAKWFEDGRCQPRCIASDVGEKSCLCALHK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0435 511 FunFam Serine decarboxylase 1 150 393 - -
Lele14g0435 511 PANTHER - 74 511 - -
Lele14g0435 511 Gene3D - 150 393 IPR015421 GO:0003824
Lele14g0435 511 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 335 356 IPR021115 GO:0016831
Lele14g0435 511 SUPERFAMILY PLP-dependent transferases 126 482 IPR015424 -
Lele14g0435 511 Gene3D Aspartate Aminotransferase, domain 1 394 482 IPR015422 GO:0003824
Lele14g0435 511 Pfam Pyridoxal-dependent decarboxylase conserved domain 221 432 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0435 Lele-ChrLele14 16031370 16033958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0435 234 417 Calmodulin-binding Proteins AT1G65960 26.425 1.22e-08 55.1