Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0431 ATGGCTGATGCTGAGGATATTCAACCTCTTGTTGTTGACAATGGAACTGGAATGGTCAAGGCTGGTTTTGCTGGTGATGATGCTCCAAGGGCTGTGTTCCCTAGCATTGTTGGGCGTCCCCGCCACACTGGTGTTATGGTTGGGATGGGTCAGAAGGATGCTTATGTGGGTGATGAAGCCCAGTCAAAAAGAGGTATCCTTACCTTGAAGTACCCCATCGAGCATGGCATAGTAAGCAATTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAACTCCGTGTCGCCCCTGATGAACACCCAGTACTTCTTACTGAGGCACCACTTAATCCCAAGGCCAACAGAGAGAAGATGACCCAAATCATGTTTGAAACTTTCAATGTGCCTGCTATGTATGTTGCCATCCAGGCTGTTCTGTCTCTCTATGCTAGTGGGCGTACAACAGGTATTGTGCTCGATTCTGGTGATGGTGTGAGCCATACAGTGCCCATTTATGAAGGGTATGCTCTCCCTCATGCAATCCTACGGCTGGATCTTGCTGGACGTGACTTGACAGATCACTTGATGAAAATTCTTACTGAGAGAGGATACTCTTTCACAACCTCTGCTGAACGGGAAATTGTACGTGATATGAAGGAGAAACTAGCATATGTGGCCCTTGATTATGAGCAAGAGTTGGAAACTTGCAAGAGTAGTTCTGCAGTGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTTATCACAATTGGCGCTGAGAGATTCAGATGCCCAGAAGTACTTTTCCAGCCATCTTTCATTGGTATGGAAGCTGCTGGAATTCATGAAACAACCTACAACTCTATCATGAAATGTGATGTTGATATTAGGAAGGATCTATATGGAAATATTGTGCTCAGTGGTGGCTCAACTATGTTCCCTGGGATTGCTGATCGTATGAGCAAGGAAATTACTGCCCTTGCTCCAAGTAGCATGAAGATCAAGGTGGTTGCACCTCCCGAGAGAAAGTACAGTGTGTGGATTGGTGGCTCTATTTTGGCATCCCTCAGCACCTTCCAACAGATGTGGATTTCCAAGGGTGAATATGATGAATCTGGTCCTGCAATTGTTCACCGTAAGTGCTTCTGA 1134 0.4594 MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETCKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0431 377 Gene3D - 10 371 - -
Lele14g0431 377 Pfam Actin 5 377 IPR004000 -
Lele14g0431 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Lele14g0431 377 FunFam Actin, muscle 182 273 - -
Lele14g0431 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Lele14g0431 377 Gene3D - 140 340 - -
Lele14g0431 377 PRINTS Actin signature 51 62 IPR004000 -
Lele14g0431 377 PRINTS Actin signature 238 254 IPR004000 -
Lele14g0431 377 PRINTS Actin signature 63 85 IPR004000 -
Lele14g0431 377 PRINTS Actin signature 142 161 IPR004000 -
Lele14g0431 377 PRINTS Actin signature 28 37 IPR004000 -
Lele14g0431 377 PRINTS Actin signature 117 130 IPR004000 -
Lele14g0431 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Lele14g0431 377 FunFam Putative actin-related protein 5 341 369 - -
Lele14g0431 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Lele14g0431 377 FunFam Actin, alpha skeletal muscle 3 167 - -
Lele14g0431 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Lele14g0431 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Lele14g0431 377 FunFam Major actin 261 340 - -
Lele14g0431 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Lele14g0431 377 PANTHER ACTIN 9 370 IPR004000 -
Lele14g0431 377 SMART actin_3 7 377 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0431 Lele-ChrLele14 15966906 15968514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0431 1 377 Cytoskeleton Gene Families AT5G09810 96.286 0.0 757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0431 14 15966906 15968514 Lele13g0674 13 18838069 18838923 CCT
Lele14g0431 14 15966906 15968514 Lele14g0574 14 17254250 17255313 CCT
Lele14g0431 14 15966906 15968514 Lele15g1810 15 11000849 11001694 CCT
Lele14g0431 14 15966906 15968514 Lele16g1838 16 10950912 10951796 CCT
Lele14g0431 14 15966906 15968514 Lele15g1812 15 11022841 11027469 hybridization
Lele14g0431 14 15966906 15968514 Lele16g1841 16 10969909 10974292 hybridization