Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0424 ATGGCCATACATTCGAAGCTCAGGCTTATTGGTTACTCACAAGATATTGTAGATGGGCAGCCAATTTTTGTTTCTTCAAATTGTTCTCCTGTCAAGGCTTGTAAATTTGAACCTGCAGGCCATGCCTTCCATTCTGCTGCCCTTAAACTACTTGGTGTTGAGGAAGAAAAATTAGACGCTGATGATAAAAAAGTGGTTGATGATAATGAACAGAATTATTTTCCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAATCTGGTTCTGGAGACAAGCAACAAGATCACTATGCATTGTTGGGTTTGACCCATCTAAGATACCTTGCTACAGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCTTTGAGATATCATCCTGACAAACAGGCGGCTCTACTTCTTGCTGAGGAGACTGAAGCTGCAAAGCAGGCAAAGAAGGATGAGATAGAAAGTCATTTTAAGGCGATTCAGGAAGCGTATGAAGTTTTAATTGATCCTGTGAAGAGAAGAATCTATGATTCCACAGATGAATTTGATGATGAGATCCCTACTGACTGTGCCCCACAAGATTTCTTCAAAGTTTTTGGTCCTGCATTTATGAGGAACGGTAGGTGGTCAGTTAATCAACCTATTCCACCTTTAGGTGAAAACAACACTCCGTTAAAAGAAGTTGATAATTTCTACAATTTCTGGTATACCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAATTTGATCTTGAGCAAGCTGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAATCTGCACGGATACGTGCTCTCGTTGATAATGCTTATAAGAGAGACCCTAGAATACTAAGGAGGAAGGAAGAGGAAAAAGCTGAGAAGCAAAGAAAAAAGGAGGCTAAGTTTCTTGCAAAGAGATTGCAGGAAGAAGAAGCTGCCAGAACTGCAGAAGAGGAGAAGCGGCAAAAGGAGGAGGAAGAGAAACGAGCTGCAGAAGCTGCTTTACAACAGAAGAAGTTGAAGGAGAAAGAGAAAAAGCTCTTGCGAAAAGAGCGTGCTCGTCTTCGAACACTTTCAGGACCTGTTGTGTCACAAAATGAAATTGGTGTATCTGAGGATGATGTAGAAAGTCTTTGTATGTCACTTGATACTGAACAGCTGAGGTGTTTGTGTGAGAAAATGGATGGCGTACAGGTGTTAGAACAAGCAAAAGTTCTCAGAGATGCGCGTGATTGCAAGAAAGATGGAGAAAATAAGAAAGAAGAAGAAACAACCAATCGGCAGAATGGTTCTGTTAAGGCTAATGGTAGTGCCTCACAAGTAAACTCAGAGAAGAAGGAAAAACCTTGGAGTAAAGAAGAGATTGATCTATTAAGAAAGGGAATGGTAAAATATCCCAAAGGAACTTCACGAAGGTGGGAGGTTATTTCAGAGTACCTTGGTACTGGACGGTCTGTGGAAGAAATTATGGGGGCAACAAAAACAATTCTCCTCCAGAAGCCTGATTCTTCCAAATCCTTTGATGCATTTCTCGAGAAAAGGAAACCTGCACAAACAATTGCATCTCCGCTGACAACTAGAGCAGAATTAGAAGGGGAATCAACTCCGGCGACCTCCCAAAGTAATGCCTCCTCGACAACAAATAACTTGGAAGACTCTAGCGGCAGCAACAAAATTGCTGACAACCAAGTCTCTCCTGGTTCTGTCACTGCAAATGGAGTATCCTCTAGTTCAGTCCAAGATATCTGGTCAGCTGTACAGGAGAGAGCATTGGTTCAGGCTTTGAAAGCCTTCCCAAAGGAAGCACCCCAGAGATGGGAAAGGGTTGCAACAGCTGTCCCTGGAAAGACCATGAACCAATGCAAGAAAAAATTTGCAATGATGAAGGAGAACTTCAGAAGCAAGAAAAGTGCAGCTTGA 1953 0.4194 MAIHSKLRLIGYSQDIVDGQPIFVSSNCSPVKACKFEPAGHAFHSAALKLLGVEEEKLDADDKKVVDDNEQNYFPSDSYSSKSKKKSGSGDKQQDHYALLGLTHLRYLATEDQIRKSYRETALRYHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPPLGENNTPLKEVDNFYNFWYTFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEESARIRALVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKRLQEEEAARTAEEEKRQKEEEEKRAAEAALQQKKLKEKEKKLLRKERARLRTLSGPVVSQNEIGVSEDDVESLCMSLDTEQLRCLCEKMDGVQVLEQAKVLRDARDCKKDGENKKEEETTNRQNGSVKANGSASQVNSEKKEKPWSKEEIDLLRKGMVKYPKGTSRRWEVISEYLGTGRSVEEIMGATKTILLQKPDSSKSFDAFLEKRKPAQTIASPLTTRAELEGESTPATSQSNASSTTNNLEDSSGSNKIADNQVSPGSVTANGVSSSSVQDIWSAVQERALVQALKAFPKEAPQRWERVATAVPGKTMNQCKKKFAMMKENFRSKKSAA 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0424 650 ProSiteProfiles Myb-like domain profile. 453 508 IPR001005 -
Lele14g0424 650 SMART dnaj_3 94 169 IPR001623 -
Lele14g0424 650 MobiDBLite consensus disorder prediction 252 275 - -
Lele14g0424 650 SUPERFAMILY Homeodomain-like 587 638 IPR009057 -
Lele14g0424 650 MobiDBLite consensus disorder prediction 531 584 - -
Lele14g0424 650 MobiDBLite consensus disorder prediction 62 92 - -
Lele14g0424 650 Gene3D - 453 511 - -
Lele14g0424 650 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Lele14g0424 650 Gene3D DnaJ domain 78 187 IPR036869 -
Lele14g0424 650 SMART sant 457 510 IPR001005 -
Lele14g0424 650 SMART sant 590 642 IPR001005 -
Lele14g0424 650 Gene3D - 584 650 - -
Lele14g0424 650 CDD SANT 594 640 IPR001005 -
Lele14g0424 650 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 10 649 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lele14g0424 650 CDD SANT 460 501 IPR001005 -
Lele14g0424 650 SUPERFAMILY Homeodomain-like 459 501 IPR009057 -
Lele14g0424 650 FunFam Myb family transcription factor 588 648 - -
Lele14g0424 650 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Lele14g0424 650 Pfam DnaJ domain 95 174 IPR001623 -
Lele14g0424 650 MobiDBLite consensus disorder prediction 422 438 - -
Lele14g0424 650 MobiDBLite consensus disorder prediction 422 464 - -
Lele14g0424 650 PRINTS DnaJ domain signature 100 118 IPR001623 -
Lele14g0424 650 PRINTS DnaJ domain signature 149 169 IPR001623 -
Lele14g0424 650 PRINTS DnaJ domain signature 118 133 IPR001623 -
Lele14g0424 650 CDD DnaJ 95 166 IPR001623 -
Lele14g0424 650 MobiDBLite consensus disorder prediction 439 455 - -
Lele14g0424 650 ProSiteProfiles Myb-like domain profile. 594 640 IPR001005 -
Lele14g0424 650 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Lele14g0424 650 Coils Coil 301 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0424 Lele-ChrLele14 15920056 15922008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0424 96 295 C2H2 Transcription Factor Family AT1G74250 28.452 7.61e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g0424 DnaJ 6.4e-18 CL0392