Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0423 ATGATGTACGGCATGGTTGCAGATGCCCTAAAAAGAAATGGTCTGTCTGATCAATATCATCCTCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAAGCTCAATCCTGTGACAGTTCCATATCTATGTCAACAGCTGACCGTGGGCTGGTACATGCCAAACTACCCTTTATTTGCTCAATGTATTGCATGCAGTTGAGGAAACCATGGCTTTCATGTGTGGGAATGGGTTCAACAGGCCAACCGCCCTCCTTCAAGAGACGTGACTCATCTGTAAACAATAGAGAGGAGGATCGTCTAATTGTGACTCCACTTGGAGCTGGGAATGAAGTGGGTCGTTCTTGTGTCTTCATGTCCTATAAAGGGAAAAATATACTGTTCGATTGCGGGATACACCCTGGTTATTCAGGTATGGCTGCTTTGCCATACTTCGACGAGATTGACCCTTCCACGGTGGATGTACTTCTCATTACTCACTTTCACTTGGACCATGCTGCATCACTGCCTTACTTCTTACAGAAGGCTATCTACAAACTATTGCTGTCAGATTATGTAAAAGTTAGCAAGGTTTCTGTTGAAGATATGTTATTTGATGAACTGGATATCAACCGATCCATGGATAAAATTGAGGTTATTGATTTCCATCAAACAGTAGAAGTGAATGGTATTCGGTTCTGTTGTTACACTGCAGGCCATGTCCTTGGTGCTGCTATGTTTATGGTTGACATTGCTGGTGTTCGAGTGCTCTACACTGGGGATTATTCCCGTGAGGAAGACCAGCATCTTCATGCTGCTGAGATTCCCCATTTATCCGTAAATGCCCTTGGTCGTGCTCAGGAGCTCCTCCTGATTCTTGATGAATATTGGGCCAACCATGCTGAACTCCAGAATATACCCATCTATTATGCTTCTTCCCTCGCGAAAAAGTGTTTGACTGTTTATGAGACATACACCCTTTCCATGAATGACAGGATCAAGAATGCAAAGTCAAACCCCTTCACTTTTAAGCACATATCAGCATTAAGTAGCATAGATGCTTTCAAAGATGTGGGACCATCAGTAGTGATGGCAAGTCCTGGTGGGCTTCAGAGTGGGTTATCACGACAGTTATTTGACAAGTGGTGTTCTGATAAGAAAAATGCATGTATTTTACCTGGTTATGTGGTTCAAGGTACTCTTGCAAAAACCATCATTAGTGAACCAAAAGAGGTTACTCTCATGAATGGACACGCCTCACCCCTCAACATGCAGGTGCACTACATATCCTTTTCTGCTCACGCTGACTCTGCTCAAACAAAAAATGGCAAAAACCATTGGAAAGCTGGCCGAAAAAACCCTGAAGCTGGCGAAACTGTCAGTGGTTTGCTTGTAAAGAAAGGCTTTACATATCAGATAATGGCATCCGATGACCTCCATGTCTTCTCGCAGCTATCGACAGCAAACATCATTCAGAGAATAACCATCCCTTATTCTAGTGCCTTTTGCGTCATAAAGCATCGGCTCAAACAGATATATAAGGGCGTAGAGTCTTCAGTAGATGAAGAATCAGGAGTACAGACGTTGCAAGTCCATGGGCGAGTGACAGTGAAGCATGAGTCTGAGAAGCACGTCTCCTTGCATTGGACATCAGATCCCATCAGTGACATTGTATCAGACTCGGTTGTGGCTCTGGTTTTGAGCATCAACCGTGAGGCTCCGAAAATGATGGATGAATCAGAGGCTTCTCGGATCGAGGAAGAGAATGAGAAGAAGGCTGAGAAGGTCATGCATGCACTCCTTGTCTCACTCTTCGGAGATGTTAAGGTTGGAGAGAATGGGAAGTTAATAATTAACGTTGATGGGAATATTGCCAAGCTTGATACATTAAGTGGGGACATTGAAAGTGACAATGAAGGCGTCAAGGAAAAGGTAAGAACAGCTTTTGAGCGGATAAAAAGTTCTGTCAAGCAAATTCCTTTGAATACCAGTGCTTAA 1977 0.435 MMYGMVADALKRNGLSDQYHPQDYLNFYCLGKREAQSCDSSISMSTADRGLVHAKLPFICSMYCMQLRKPWLSCVGMGSTGQPPSFKRRDSSVNNREEDRLIVTPLGAGNEVGRSCVFMSYKGKNILFDCGIHPGYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLQKAIYKLLLSDYVKVSKVSVEDMLFDELDINRSMDKIEVIDFHQTVEVNGIRFCCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDQHLHAAEIPHLSVNALGRAQELLLILDEYWANHAELQNIPIYYASSLAKKCLTVYETYTLSMNDRIKNAKSNPFTFKHISALSSIDAFKDVGPSVVMASPGGLQSGLSRQLFDKWCSDKKNACILPGYVVQGTLAKTIISEPKEVTLMNGHASPLNMQVHYISFSAHADSAQTKNGKNHWKAGRKNPEAGETVSGLLVKKGFTYQIMASDDLHVFSQLSTANIIQRITIPYSSAFCVIKHRLKQIYKGVESSVDEESGVQTLQVHGRVTVKHESEKHVSLHWTSDPISDIVSDSVVALVLSINREAPKMMDESEASRIEEENEKKAEKVMHALLVSLFGDVKVGENGKLIINVDGNIAKLDTLSGDIESDNEGVKEKVRTAFERIKSSVKQIPLNTSA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0423 658 SUPERFAMILY Metallo-hydrolase/oxidoreductase 99 435 IPR036866 -
Lele14g0423 658 Gene3D - 106 273 IPR036866 -
Lele14g0423 658 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 448 652 - -
Lele14g0423 658 Pfam Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term 452 650 IPR021718 -
Lele14g0423 658 CDD CPSF3-like_MBL-fold 101 276 - -
Lele14g0423 658 FunFam Cleavage and polyadenylation specificity factor subunit 3 267 426 - -
Lele14g0423 658 Gene3D - 274 424 - -
Lele14g0423 658 SMART CPSF73_100_C_2 449 652 IPR021718 -
Lele14g0423 658 Pfam Metallo-beta-lactamase superfamily 111 265 IPR001279 -
Lele14g0423 658 SMART Lactamase_B_5a 113 293 IPR001279 -
Lele14g0423 658 SMART Beta_Casp_2 279 398 IPR022712 -
Lele14g0423 658 Pfam Beta-Casp domain 279 398 IPR022712 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0423 Lele-ChrLele14 15909758 15917699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0423 1 59 Phospholipase D Gene Family (Wang group) AT4G00240 43.750 2.16e-08 55.5