Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0395 ATGAAACAAGCACCCCATGTGCAGGCACAGGATGAACATAGATCTGGACATGGACCGAGAGTGTTAAGGATCCAGGAGAAGGAATTAATTAGATTGAAACGTGAGGCAAAGCACAAAGGTGGATTCTATGTTGATCCAGAAGCCAAACTTATATTTATTATTCACATCCGTGGTATTAATGCCATGCATCCAAAGACTAGGAAGATCTTGCAACTCCTTCGATTGAGACAGATCTTCAATGGTGTATTCCTTAAAGTTAACAAAGCCACAGTGAACATGCTGCACAGAATTGAACCTTATGTGACTTATGGATACCCAAATCTGAAGAGTGTTAGAGAACTTATTTACAAGAGAGGTTATGGTAAGGTCAACAAGCAGAGAATTGCTTTAACTGACAACTCCATCGTTGAGCAGGAACTGGGCAAACATGGAATCATTTGCACTAAGGATCTTATCCATGAGATCATGACAGTTGGTCCCCACTTCAAGGAAGGCAACAACTTCCTTTGGTTTATGTCTGAAATGGCACAAGCTATAAGAGAAGGAAATTAA 552 0.404 MKQAPHVQAQDEHRSGHGPRVLRIQEKELIRLKREAKHKGGFYVDPEAKLIFIIHIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATVNMLHRIEPYVTYGYPNLKSVRELIYKRGYGKVNKQRIALTDNSIVEQELGKHGIICTKDLIHEIMTVGPHFKEGNNFLWFMSEMAQAIREGN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0395 183 PANTHER 60S RIBOSOMAL PROTEIN L7 23 172 IPR039699 -
Lele14g0395 183 Gene3D - 50 156 IPR036919 -
Lele14g0395 183 Pfam Ribosomal protein L30p/L7e 51 101 IPR016082 -
Lele14g0395 183 SUPERFAMILY Ribosomal protein L30p/L7e 50 171 IPR036919 -
Lele14g0395 183 FunFam 60S ribosomal protein L7 50 154 - -
Lele14g0395 183 ProSitePatterns Ribosomal protein L30 signature. 69 101 IPR018038 -
Lele14g0395 183 CDD Ribosomal_L7_archeal_euk 50 171 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0395 Lele-ChrLele14 15640567 15643548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0395 25 170 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 86.986 1.30e-92 268