Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0373 ATGAATTTAATAGTTTATAATATGGGCATGACCCAAGATCCACAGGCCCATTTCGTTCAAGCTTCGGAAGCCGGAAATATGTCTCACAGGAAGTTTGAGCACCCAAGGCATGGTTCCCTTGGCTTTCTCCCTAGGAAGCGTGCTGCTCGTCATCGTGGAAAGGCAAAGGCTTTCCCAAAGGATGATCCCACCAAGCCTTGCAGATTGACTGCCTTTATGGGTTACAAGGCTGGGATGACCCACATTGTTAGAGAAGTTGAGAAACCTGGATCAAAGCTTCATAAGAAGGAGACTTGTGAGGCTGTTACCATTGTTGAAACTCCTCCAGTGGTGGTTGTTGGAGTTGTTGGATATGTAAAGACACCTCGTGGACTACGCACGTTAAATACAGTCTGGGCTCAGCATTTAAGTGAGGAACTTAAAAGGAGGTTCTACAAGAACTGGTGCAAGTCTAAGAAGAAGGCATTTACCAAATATTCTAAGAAACATGAAACTGAAGAAGGAAAGAAGGATATTCAAGCACAGCTTGAAAAATTGAAAAAATATGCATCTGTCATCCGTGTTTTGGCCCATACTCAGATACGGAAGGTGCAAGGTCTAAAGCAAAAGAAGGCACATCTGATGGAGATCCAAGTTAATGGTGGGACAATAGTACAGAAGGTGGACTATGCATATGGCTTCTTTGAGAAGCAAGTCCCAGTGGATGCTGTTTTCCAGAAAGATGAGATGATAGATATCATTGGTGTGACAAAGGGTAAAGGTTATGAAGGCGTTGTAACTCGTTGGGGTGTCACTCGCCTTCCTCGCAAGACACACAGGGGTCTAAGAAAGGTTGCTTGTATTGGGGCATGGCACCCTGCACGTGTTTCTTTCACAGTTGCCAGGGCTGGACAGAATGGATACCATCACCGTACTGAGTTGAATAAGAAGGTCTACAGGGTTGGCAAGGCAGGGGAAGAGTCACACTCGGCCATCACCGATTATGACAGGACTGAGAAGGACATCACACCAATGGGTGGATTCCCTCACTATGGGGTGGTAAAGGATGATTATATTATGGTTAGGGGATGCTGTGTGGGACCAAAGAAGCGTGTGCTTACCCTTCGTCAGTCATTACTGAAGCAAACTTCTCGTGTTGCCCTTGAAGAGATTAAGCTCAAGTTCATTGACACTTCCTCCAAGTTTGGACATGGTCGCTTCCAGACCACTCAGGAGAAACAGAAGTTTTTTGGTCGCTTGAAGGCCTGA 1248 0.4567 MNLIVYNMGMTQDPQAHFVQASEAGNMSHRKFEHPRHGSLGFLPRKRAARHRGKAKAFPKDDPTKPCRLTAFMGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPVVVVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKKHETEEGKKDIQAQLEKLKKYASVIRVLAHTQIRKVQGLKQKKAHLMEIQVNGGTIVQKVDYAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYRVGKAGEESHSAITDYDRTEKDITPMGGFPHYGVVKDDYIMVRGCCVGPKKRVLTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0373 415 SUPERFAMILY Translation proteins 30 396 IPR009000 -
Lele14g0373 415 Pfam Ribosomal protein L3 27 396 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele14g0373 415 FunFam 60S ribosomal protein L3 109 233 - -
Lele14g0373 415 FunFam Ribosomal protein L3 291 415 - -
Lele14g0373 415 Gene3D Translation factors 70 411 - -
Lele14g0373 415 Gene3D Ribosomal protein L3, domain 3 27 300 IPR044892 -
Lele14g0373 415 Gene3D - 109 233 - -
Lele14g0373 415 FunFam 60S ribosomal protein L3 252 300 - -
Lele14g0373 415 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 27 410 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele14g0373 415 FunFam 60S ribosomal protein L3 27 105 - -
Lele14g0373 415 ProSitePatterns Ribosomal protein L3 signature. 238 261 IPR019926 -
Lele14g0373 415 FunFam 60S ribosomal protein L3 70 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0373 Lele-ChrLele14 15387393 15391215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0373 27 412 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 87.306 0.0 702