Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0350 ATGGCTTCTCATTCTCAACCTTCCGGTTCTATCCATTTCTTCAAAATCATCTTGAAATCCAATCTTGAAGCCATTAGGATTCCAAACAAATTTACAGCAAGATATGGAAGTGGTTTGTCAAACCCTGTGTTTCTGAAGCCTCCTGATGGGAAAGAGTGGAAAGTGTACCAGACAAAACATGATAATGATGAGGTCTGGTTTCAAAAGGGGTGGAAGGAATTTGCTCGCTTTTACTCTCTAGATGAAGGGCATTTGATTTTGTTCAAGTATGAAGCAACTTCTCAGTTTGATGTAAGCGTATTCGATAAGAGTGCACTTGAAATAGACTATCCTTCTTCATCAAAGAATAATAATCCCAGTGATGATACAGTTGAGGTCTTGGATGAGATGCCTCCGAACAGAAATGCTACCCACAAAACACCTTTTTCATGTTCTAGGCCTCATAAGAAAATGAGAAGTCAGCAGAATTTTCTTTTAGGTTCAGAAACTAATTATGTTCAATGTCAAGGAACAGAGTTTCAGAAATCAGCCAATGCAGAATTGAAGTTTCCTAAGAAGGAACAAGAAGAAGACATGGGAGCAAGGATTTTTGCCAAGAGTACATGCTTGAATTCTGAGCATAGAAGGAAGAGAGCATTAACTACTGTGGAAAATATCAGAGCTATAAACAGTGCGAGTTCTTTCGAATCCGAAAATCCCTTTTTCATGATAATCATGCAGCCTTCATATGTCAGTCATAAATGTTACTTGGTGATGCCAACAAAATTCGCTAGAAAACATTTGGAGAAAGAGAGTGGTGTTGTGAAACTTGAGGCCTTGGATGGGAGAACTTGGCCTACTAGTTATAAGATTCCTAGAATAAAAGATGGATGGGATAAGTTTGTTATGGAAAATGTTAAAATCAGAAAGAGGACTAAAAAGGAGCAGATCAGCAGTATGCAACAGACTCCTATTGAAAAGGCTATCTCTTTCAAGTCTGAAAATCCTCATTTTATGGTTAAGATGACACGTGCTTACATTGATGGCAGATCAAACTTGCATGTGCCATCACAATTTGCAAGAAAACATCTTCACGACTGTACTGAGAATGTCAAACTTGTTGTACAAGATGTAACTTGGCCTGTTGGGTATGTATTTAGATTAACTCGTCCAGGAATTGAAAAGCATGAACTTTCTATTTGTGGATGGAGGCAATTTCGCAAGGATAATGACTTGAAATTAGGTGATACTTGTGTCTTTGAGCTCATCCCCAACGTCAAACTTACACTTCAAGTAACAATTTTACGAGCCACTAATCATTCGGCAAACTCAGGTAAAATGGAAAACCAATCTCACAAGATTCCTCATTATATCCTGTCTTGA 1362 0.3803 MASHSQPSGSIHFFKIILKSNLEAIRIPNKFTARYGSGLSNPVFLKPPDGKEWKVYQTKHDNDEVWFQKGWKEFARFYSLDEGHLILFKYEATSQFDVSVFDKSALEIDYPSSSKNNNPSDDTVEVLDEMPPNRNATHKTPFSCSRPHKKMRSQQNFLLGSETNYVQCQGTEFQKSANAELKFPKKEQEEDMGARIFAKSTCLNSEHRRKRALTTVENIRAINSASSFESENPFFMIIMQPSYVSHKCYLVMPTKFARKHLEKESGVVKLEALDGRTWPTSYKIPRIKDGWDKFVMENVKIRKRTKKEQISSMQQTPIEKAISFKSENPHFMVKMTRAYIDGRSNLHVPSQFARKHLHDCTENVKLVVQDVTWPVGYVFRLTRPGIEKHELSICGWRQFRKDNDLKLGDTCVFELIPNVKLTLQVTILRATNHSANSGKMENQSHKIPHYILS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0350 453 Pfam B3 DNA binding domain 331 430 IPR003340 GO:0003677
Lele14g0350 453 Pfam B3 DNA binding domain 235 298 IPR003340 GO:0003677
Lele14g0350 453 Pfam B3 DNA binding domain 20 103 IPR003340 GO:0003677
Lele14g0350 453 Gene3D - 6 105 IPR015300 -
Lele14g0350 453 SUPERFAMILY DNA-binding pseudobarrel domain 230 298 IPR015300 -
Lele14g0350 453 CDD B3_DNA 329 429 IPR003340 GO:0003677
Lele14g0350 453 ProSiteProfiles B3 DNA-binding domain profile. 331 431 IPR003340 GO:0003677
Lele14g0350 453 CDD B3_DNA 233 298 IPR003340 GO:0003677
Lele14g0350 453 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 302 431 IPR044837 -
Lele14g0350 453 SMART B3_2 13 104 IPR003340 GO:0003677
Lele14g0350 453 SMART B3_2 331 431 IPR003340 GO:0003677
Lele14g0350 453 SMART B3_2 235 314 IPR003340 GO:0003677
Lele14g0350 453 ProSiteProfiles B3 DNA-binding domain profile. 10 104 IPR003340 GO:0003677
Lele14g0350 453 SUPERFAMILY DNA-binding pseudobarrel domain 9 111 IPR015300 -
Lele14g0350 453 CDD B3_DNA 12 102 IPR003340 GO:0003677
Lele14g0350 453 SUPERFAMILY DNA-binding pseudobarrel domain 326 430 IPR015300 -
Lele14g0350 453 Gene3D - 310 433 IPR015300 -
Lele14g0350 453 Gene3D - 212 303 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0350 Lele-ChrLele14 15059365 15063794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0350 297 439 B3 DNA Binding Superfamily AT3G18990 28.671 7.42e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele14g0350 B3 1.1e-12 CL0405