Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0336 ATGGAGAGTTCTCACTCTTCAACTCTCCTAGGCGCAGCACTTGAGCTTCGGAAGAACGCCGGCACTATCTTGTATAAGGGCGGCACGTTTATTTCTGAAGCCATGGCGCTGATCCTCCATGCAGGGGAAACTAATAAAAATGCTTACAAGACTCTCATTGCTGCTGAGTACAGTGGTGTGTATGTTAAATTGGCCCCAAATTTTGAGATGGGTGTTTCTAATAAAACCCCTGAATTTATCAAGATGAATCCTATTGGCAAGGTGCCTGTGTTGGAAACACCAGAAGGTCCAGTTTTTGAAAGTAATGCCATTGCTCGCTATGTTGCTAGATTGAAGGGTGACAATGCGTTGTATGGATCTTCTCTAATGGACTATGCTCACATTGAACAATGGATTGATTTTTCATCCCTAGAGATTGATGCTAATATTCTTGCCTGGTTTAGACCAAGAATGGGAAGAGGCACTTACCTTCCTCCTGTTGAGGAAGCTGCAATTTCTGCACTAAAGAGAGCGTTGGGTGCATTGAACACCCACCTGGCTTCTAATACGTATTTGGTTGGGCATTCTGTGACCCTAGCAGACATTATTTTGACATGCAATTTGTTTAGGGGTTTCACTAATCTCATGACCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAACCCAAATTCCATAAGATCTTAGGTGATGTTAAGCAGGCTGAAACTGTTATACCCATAAAATCTGCACAGAAGGCCAAAGAAGCTAAGCCTAAGAAAGAAGCTCAACCAAAGAAAGAGGCCCCTAAAGAGGCTGAAAAGACGAAAGAGGCTGAAGAGGAGGAGGCACCAAAGCCCAAACCCAAGAATCGTCTTGATCTTCTTCCCCCAAGTAAGATGGTATTGGATGAGTGGAAAAGACTCTACTCGAACACCAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGAGGAGAATACAGTTTCCTTTGTGACTATGAACAAGGTTGGTGGATTTCTTCAGAGGATGGATCTTGCTCGCAAATATGCATTTGGGAAAATGCTTGTGATCGGATCTGAGCCACCATTTAAGGTGAAGGGCTTGTGGCTATTCCGTGGGCAAGAAATACCACAATTCGTCATTGATGAATGCTACGATATGGAACTGTACGAGTGGAGAAAGGTTGATATCTCAGATGAAGCTCAGAAGGAGCGTGTCAATCAGATGATTGAAGATTACGAGCCTTTTGAGGGTGAGCCTCTCTTGGATGCTAAGTGCTTCAAGTAA 1353 0.4375 MESSHSSTLLGAALELRKNAGTILYKGGTFISEAMALILHAGETNKNAYKTLIAAEYSGVYVKLAPNFEMGVSNKTPEFIKMNPIGKVPVLETPEGPVFESNAIARYVARLKGDNALYGSSLMDYAHIEQWIDFSSLEIDANILAWFRPRMGRGTYLPPVEEAAISALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFRGFTNLMTKSFTSEFPHVERYFWTLVNQPKFHKILGDVKQAETVIPIKSAQKAKEAKPKKEAQPKKEAPKEAEKTKEAEEEEAPKPKPKNRLDLLPPSKMVLDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWRKVDISDEAQKERVNQMIEDYEPFEGEPLLDAKCFK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0336 450 Pfam Elongation factor 1 gamma, conserved domain 289 397 IPR001662 GO:0003746|GO:0006414
Lele14g0336 450 Gene3D - 114 251 - -
Lele14g0336 450 SMART EF1G_2 289 397 IPR001662 GO:0003746|GO:0006414
Lele14g0336 450 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 290 450 IPR001662 GO:0003746|GO:0006414
Lele14g0336 450 SUPERFAMILY eEF1-gamma domain 290 450 IPR036433 GO:0003746|GO:0006414
Lele14g0336 450 FunFam Elongation factor 1B gamma 35 108 - -
Lele14g0336 450 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 290 450 IPR036433 GO:0003746|GO:0006414
Lele14g0336 450 SUPERFAMILY Thioredoxin-like 34 119 IPR036249 -
Lele14g0336 450 FunFam Elongation factor 1 gamma 114 250 - -
Lele14g0336 450 Pfam Glutathione S-transferase, C-terminal domain 163 231 IPR004046 -
Lele14g0336 450 SFLD Main (cytGST) 47 224 - -
Lele14g0336 450 SFLD Glutathione Transferase (cytosolic) 47 224 IPR040079 -
Lele14g0336 450 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 121 247 IPR010987 -
Lele14g0336 450 MobiDBLite consensus disorder prediction 254 291 - -
Lele14g0336 450 MobiDBLite consensus disorder prediction 251 296 - -
Lele14g0336 450 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 35 450 IPR044628 GO:0004364
Lele14g0336 450 SUPERFAMILY GST C-terminal domain-like 107 244 IPR036282 -
Lele14g0336 450 CDD GST_C_EF1Bgamma_like 124 246 - -
Lele14g0336 450 Pfam Glutathione S-transferase, N-terminal domain 37 110 IPR004045 -
Lele14g0336 450 FunFam Elongation factor 1-gamma 1 290 450 - -
Lele14g0336 450 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 35 116 IPR004045 -
Lele14g0336 450 Gene3D Glutaredoxin 34 108 - -
Lele14g0336 450 CDD GST_N_EF1Bgamma 39 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0336 Lele-ChrLele14 14931281 14934690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0336 35 450 Eukaryotic Initiation Factors Gene Family AT1G57720 74.519 0.0 631