Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0329 ATGCACCAATCTCTGCCTGCTCAATTTTGTGAGTCATCTGCTATGGCAAAGAAGCGTGATCTATCATACACTGCCTCGTCCACCTTTCTTCAGCAACAGTTTCAAAACCCTAGTAACAACTGGAATCCAAAGGGATGGGACTGGGATGCTGTCAGATTCATTGCCAAACCATTGGACACTAACAACCTTGAACCGGGAGCTCCCACATCCTCTATAAAAGACCAGCGTACCAATTTGTACAACCACAATGCTGTTGACAATGATGAGCATAAAGAAAGCCTTTGTTTGAAACTTGGTGGTCGCCCGGCCTTCAATACATTGCAGGAGCCCATGTCCCGCCCGAGCAAAAGGTTACGTTCTCACTCACCTGGTGGGCCCTCTTACCCTATGTGTCAGGTAGATGACTGTGAGGAAGATCTCTCCAATGCCAAAGACTATCACCGGCGACACAAAGTTTGTGAGCATCACAGCAAATCTTCTAAAGCGTTCGTTGCTAACCAATCACAACGATTCTGCCAACAATGTAGCAGATTTCACCTGCTGTCAGAGTTCGATGAGGGGAAGAGAAGTTGTAGGCGTAGACTTGCTGGTCATAATCGTCGCAGGAGAAAAACTCAAGCAGACCTCACTGAAAACCAGGATAATGCAACATCTAGGAATTTGGATATTGTTGACTTGTTGACTACAATTGCTGATGCGCAAGGGAAATTTGAGGAAAGAAGTATAACTTGTTCACAACTTCCTCAGAAAGAGACGCTTGTTCACATTCTTGATAGGATAAATTCATTACCTTTGCAAGCTGACCTTGCTACAAATTTGGCCAATGTTGGAAATTTATGTATGAGCAGTCTTGGGCAAACTTCTTCAAATCATCATGATAAATTGAAACAGAACAAATCTTCTCCATCAACTATGGACTTGCTTAATGTTCTTTCAGAAACTCTATCAGCATCTACTCCTGATGCCATTGCTTTACACTCTAAAAAATGCAAATCTAGTTACAGTGAGAAATCTGGGACAAGTGTTGGTGACCAAACAACTGATTGTAGTCTTAGGACGGGGCAACCATTAGAATTTACTTCAATTGGAGCAGAAAAAAGTAGTGGCAGTTACCAGTTGCCTGTTGAGGATTCAGTCAGCCAGATTCAAGAGACTAAAAACAAATTACCATTGCAGCTTTTTAGCTCCTCTTTAGATGATGAAAGCCAGCCAAAAATGCCTTCTCGAAAGTATCTCTCATCAGACAGTAGTAATCCTATTGAGGAGATGTCACCATCTTCTTCACCCTCTTGGGTACATAAGCAGTTTTCTTCACAGAGTATAATTGAAGGTATCAATTCAGACAAAATTTTAATTGGAAGAGTGACCAATGCACATAAGGAAGCCAGCCAAAGCAATGACTGTGATATTTCTCTTGATCTTTTTGGAGGATCAAATAACAGAGTTCAACCTAGCTCTGTGCAAAGTGTTCCAGTTCAAACTGGGTACACATCTTCGGGATCTGATCACTCACCTCCTAGTTTGAATTCAGATGCTCAGGGTCGTACTGGTCGAATATTGTTCAAACTATTTGGTAAGGATCCTAGTCATTTCCCTGGAACACTGCGAAATCAGATTTACAATTGGCTTTCTAATAGCCCTTTGGAGATGGAGAGCTACATAAGACCTGGCTGTGTGGTCCTTTCAGTCTATGTTTCCATGTCTTCTTCTGCCTGGGAGCAACTAGAAGAAAATTTTGTTCAACATGTTCATTATTTAATTCAAACTTCTGATTCTAAATTTTGGAGAAATGGGAGGTTTCTAGTTCATGCTGGCAGTCAGAAAGATACGCTTACGAAAAAGATGGAGAACATGGAGGTCTCCGGTGTTGATATCTGTCTCCCCTTTGGCAATTGTTGGGGGCCAAGAAACATCAATTTCATTGAAGGGATTCATTGCACAAGTACGAGTTATTACACATCAAAGGAAGTTGTCGTGTCTGTTTATTCGGGTATGACATATGATGAAGTAAAATTGGGTGGATTTAAAGTACACAATGCATCTCCTGGGGTTCTTGGTCGCTGTTTCATTGAGGTTGAGAATGGTTACAAGGTTAACAGTTTTCCAGTTATAATAGCCAATGCAACTATTTGTAAGGAATTGCGGTTACTTGAGTCTGAGTTTGTTAAGGAGGAAAAATTCAGTGATGCCATTGCTGAAGAGAACATTTGTGAATTTGCAAGGACCGGGTCAAGGGAGGAGGTTATACATTTTTTGAATGAGCTTGGCTGGCTATTCCAAAGGAAAAGATTCTCATATGCACACGAGGTTCCAGTTTTTTCACTTGACAGGTTCAAATTTTTACTCACATTTTCTGTGGAAAGAAACTGTTTAGTGGTAGTTAAAACCCTTATGGATATGCTGGTTGAGGAACACTTGGACGGGGAATGGCTGTCCAAGGGATCGGTGGAGATGCTGAATGCTATTGAACTATTAAACCGGGCTGTGAAAAGACGGTATATAAAAATGGTTGACTTGCTTATCCACTATTTTATACCTAGCAAAAATGACACATCCAGGAAATATGTATTTCCGCCGAATCTTGAGGGACCTGCTGGTATTACACCCTTACATCTGGCTGCTTGCACATCAGGTTCTGACGGTATAATTGACTCTTTGACAAATGATCCGCAAGAGATTGGATTGAACTGCTGGGAGTCTCTTGCGGATGCAAATGGGCAAACTCCTTATGCCTATGCCGTGATGAGAAATAATCACTCTTATAACACGCTGATTGCTCGTAAAATTGCTGATAGAGAAAAATGCCAAGTTTCGGTAGCAATTGAAACCGAGATAGAGCAACCGTTGGCCAGTATTCAGCATAAAACAAGCCCAAGCAATGAAGTGGGACAAGGTCAGAGATCTTGTTCTAAGTGTGCAATTGCAGCAATGTACTACAACAGGAGGGTTTTGCGCTCACAGGGACTGCTTCACCGCCCTTACATTCATTCGGTTCTCGCTATTGCTGCCGTTTGCGTATGTGTTTGCCTATTCTTCCGTGGAGCCCCTGACATAGGTTCAGTTGCACCCTTCAAGTGGGAAAATTTGGATTATGGCACATTGTAA 3105 0.4193 MHQSLPAQFCESSAMAKKRDLSYTASSTFLQQQFQNPSNNWNPKGWDWDAVRFIAKPLDTNNLEPGAPTSSIKDQRTNLYNHNAVDNDEHKESLCLKLGGRPAFNTLQEPMSRPSKRLRSHSPGGPSYPMCQVDDCEEDLSNAKDYHRRHKVCEHHSKSSKAFVANQSQRFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTQADLTENQDNATSRNLDIVDLLTTIADAQGKFEERSITCSQLPQKETLVHILDRINSLPLQADLATNLANVGNLCMSSLGQTSSNHHDKLKQNKSSPSTMDLLNVLSETLSASTPDAIALHSKKCKSSYSEKSGTSVGDQTTDCSLRTGQPLEFTSIGAEKSSGSYQLPVEDSVSQIQETKNKLPLQLFSSSLDDESQPKMPSRKYLSSDSSNPIEEMSPSSSPSWVHKQFSSQSIIEGINSDKILIGRVTNAHKEASQSNDCDISLDLFGGSNNRVQPSSVQSVPVQTGYTSSGSDHSPPSLNSDAQGRTGRILFKLFGKDPSHFPGTLRNQIYNWLSNSPLEMESYIRPGCVVLSVYVSMSSSAWEQLEENFVQHVHYLIQTSDSKFWRNGRFLVHAGSQKDTLTKKMENMEVSGVDICLPFGNCWGPRNINFIEGIHCTSTSYYTSKEVVVSVYSGMTYDEVKLGGFKVHNASPGVLGRCFIEVENGYKVNSFPVIIANATICKELRLLESEFVKEEKFSDAIAEENICEFARTGSREEVIHFLNELGWLFQRKRFSYAHEVPVFSLDRFKFLLTFSVERNCLVVVKTLMDMLVEEHLDGEWLSKGSVEMLNAIELLNRAVKRRYIKMVDLLIHYFIPSKNDTSRKYVFPPNLEGPAGITPLHLAACTSGSDGIIDSLTNDPQEIGLNCWESLADANGQTPYAYAVMRNNHSYNTLIARKIADREKCQVSVAIETEIEQPLASIQHKTSPSNEVGQGQRSCSKCAIAAMYYNRRVLRSQGLLHRPYIHSVLAIAAVCVCVCLFFRGAPDIGSVAPFKWENLDYGTL 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0329 1034 Pfam SBP domain 131 204 IPR004333 GO:0003677
Lele14g0329 1034 MobiDBLite consensus disorder prediction 105 126 - -
Lele14g0329 1034 Gene3D - 792 945 IPR036770 -
Lele14g0329 1034 FunFam Squamosa promoter-binding-like protein 14 123 192 - -
Lele14g0329 1034 SUPERFAMILY SBT domain 129 210 IPR036893 GO:0003677|GO:0005634
Lele14g0329 1034 ProSiteProfiles Zinc finger SBP-type profile. 128 205 IPR004333 GO:0003677
Lele14g0329 1034 Gene3D - 122 192 IPR036893 GO:0003677|GO:0005634
Lele14g0329 1034 MobiDBLite consensus disorder prediction 195 214 - -
Lele14g0329 1034 SUPERFAMILY Ankyrin repeat 824 921 IPR036770 -
Lele14g0329 1034 MobiDBLite consensus disorder prediction 395 432 - -
Lele14g0329 1034 MobiDBLite consensus disorder prediction 482 512 - -
Lele14g0329 1034 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 68 816 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0329 Lele-ChrLele14 14867506 14872700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0329 14 1034 SBP-box Gene Family AT1G20980 48.302 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele14g0329 SBP 1.5e-28 No_clan