Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele14g0323 | ATGGACATCGCTTCTCTGGAGAAATTCCTTCAGGAGAGGATTAAAATTGGTGGCAAGGCTGGTGCCCTGGGCGATTCCGTCACCGTTAGTCAGGACAAGAGCAAGATTACCAATAGAGGAGGTCGCCTTTGGCTTCAATGTCGGAAAGGATTCAAAATTTTGTTGCACCTACTCAAAGCTGGATATTTCTTGCATAAAGGGGGACAGAATAGTCCTAACAGAAGTCTAAAAGATTTTCCAATTCGAACAGTTTATTTTGAGAGTCCTTGTGCATTTTCAGAGATCAACTCGTTTATCCGTGACATAGCAGCCATATATGGTTTGCAGCAAGTGCTTGGAGAAGGTGCTCTGGTTTCAACTCATGATCATATACAGAGAGGAGCTGAAGAGGCCACTGATAAAGCAGAAAAGAGTTGA | 417 | 0.4341 | MDIASLEKFLQERIKIGGKAGALGDSVTVSQDKSKITNRGGRLWLQCRKGFKILLHLLKAGYFLHKGGQNSPNRSLKDFPIRTVYFESPCAFSEINSFIRDIAAIYGLQQVLGEGALVSTHDHIQRGAEEATDKAEKS | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele14g0323 | 138 | Pfam | Ribosomal L22e protein family | 1 | 37 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 | |
| Lele14g0323 | 138 | Gene3D | - | 1 | 42 | IPR038526 | - | |
| Lele14g0323 | 138 | PANTHER | 60S RIBOSOMAL PROTEIN L22 | 1 | 37 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele14g0323 | Lele-ChrLele14 | 14819988 | 14821100 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele14g0323 | 1 | 37 | Cytoplasmic Ribosomal Protein Gene Family | AT3G05560 | 83.784 | 1.73e-15 | 66.2 |