Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0320 ATGCCCCTCTCCATCAATATTGGCTTTGGCTACTCCATTGCCATCGCCCTCGCTTTCCTCGTTCTTGCCTCTGCGCTCATTCTCTCTTTCTACCTCTGTTGCCGTAACCGTAACCGCATCCCCATTTCGAATTCGAACCCGATTCCGAATATGAACCCGATATCTTCTGGGTCGAATGTGGGATCCGAGGGTATTGTTCTGCCTCGGGTGATTTTTGTGGCGGAGGAGGAGGAGGAGGATGACGAGAGCGCCGTCGTGGGGCTCGACGAGAACGTTATAAACTCGTACCCGAGGTTTCAGTACAGTAGGGGTGCTATGGGGGTTGGAAGCAGTACGATGTGTTCGATCTGTTTGTGTGAGTATAGGGATTCGGAGATGCTAAGGATGATGCCGGAGTGTCGCCATTATTTCCACCTCTTGTGCCTTGACTCTTGGCTTAAGCTAAATGGGTCATGCCCTGTTTGTCGGAACTCGCCGCTCATGACGCCGATTTCAACGCCTCTGCAAGAAGTGGTTCCGCTCTCTCAGTACCCGGCTGATCGGAGGCGACGGAGGTGA 558 0.5323 MPLSINIGFGYSIAIALAFLVLASALILSFYLCCRNRNRIPISNSNPIPNMNPISSGSNVGSEGIVLPRVIFVAEEEEEDDESAVVGLDENVINSYPRFQYSRGAMGVGSSTMCSICLCEYRDSEMLRMMPECRHYFHLLCLDSWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPADRRRRR 185
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0320 185 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Lele14g0320 185 SUPERFAMILY RING/U-box 113 161 - -
Lele14g0320 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 160 IPR013083 -
Lele14g0320 185 CDD RING-H2_PA-TM-RING 114 156 - -
Lele14g0320 185 Pfam Ring finger domain 113 156 IPR001841 -
Lele14g0320 185 SMART ring_2 114 155 IPR001841 -
Lele14g0320 185 PANTHER RING-H2 FINGER PROTEIN ATL67 6 184 IPR044289 GO:0016567|GO:0016740
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele14g0320 Lele-ChrLele14 14805350 14805907 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0320 87 182 C3H Transcription Factor Family AT2G35910 54.167 9.53e-33 115