Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0310 ATGCGGGTTTCTGATCTCCACTTGAAGAAGGAGCTCACTCAAATTCGCAAAGCTGCTCGTGTATTGAGGGATCCTGGTACTACTTCTTCGTGGAAGTCGCCACTTAGTTCGTCGAGATCTGTCGCGGCTGCTTCTGCTTCTGCATGGAAGAACAATGGCAACTCTCAACTTCATTCTCATTTGTCTCTTCCGAGTGGAAGCAACAACGGGAAGGACAAGATGGTGTTTTTGTACAATTGGAAGAATTACAAATCATCAAGTGAGAAACACAATGGCGATGATAAAGACGAGGAAGAAGAAGAAGAAGATTTTGATGAAGATGGTGGTGGAAATGATGAATCTTCGTCTCTTTTGGGGACTTTCGAGGATAGCCTCAGTGACACCCGCAATGGTTGCGATTCCAAGAGCGATACTTGCTTAGGGGTAGGTGGGAGTACGATTCGTTCTTCCATTTTCAGGTGTAAAGATGCAAATCCTATTGCGTTGGGCACACCATCGACCAGAAGAGCACTGGAGATTAAGAAAAAGAGTAAGAAAAGCAAAAATTCCCATTCGGACATTCTTAGACAATATCAGCAAAGAGAAGCCAATCTTGGTAAAGCTTTAGTGAATCCCAAGCATCATATTCATCGGTCAATTGCTTATAGCCGGGAGGACTCAGTTGGGCAGTCTGATGATACTGAAGATTACTGCAATTTCGAAGATTTAACACGAAACTCAGGGCCATCTCCTTTGCTTTTGAAGCTCAAGCGTAAGAATTGGTCTCGCCCTAACTCAAAGTTATTGAAAAGTAATAGAAAAGAGGGTTCTCCTTATAGTACTCCTGCAATGTCTACCAGTTCTTATAATAGGTATGGTCAACATAATCCTAGTACTGTTGGATCCTGGGAAGGTACGACAACCTCTGTAAATGATGCTGATGATGAAGTAGATGATCTTTTGGTTTTGCCTGGTCGCCAAGGATGCGGGATACCTTGCTATTGGTCAAAGAAGACTCCAAAACATAGGGGGATGTGTAGGAGTTGCTATTCACCTTCACTTTCGGACACTCTAAGGAGGAAAGGAAGTAGCATGCTTTGTGGAAGTCAAACTATCTATCCTAGACACCGGAGATCCTTGTCAAGCTCTCACAAGCGGACAATTTCCTCAAGGAGTGCTCTAGGTGTTCTCCCATTGCTCACTAACAGTGATCATGTTAGAGGGTCATCTCTGGGAACTGGCATGAGTGATGGTGAACTTTCTACAAATTATGGGGAGCTTGATCTTGAGGGTATAAGCAGGTTGGATGGAAGAAGGTGGTCCTCAAGTTGTAGGAGTCAAGAAGGATGGGAGATTGTAGCTTTCAATGGAGAAGGGGATGATGAAAGCACTCCAGAAAATAGTAGGAGTTTCAGTCAAAAGTATAAGCCTATGTTCTTTGGTGAATTGATTGGGCAGAATATTGTGGTCCAATCACTTATAAATGCTGTTTCAAGAGGTCGAATTGCTCCTGTTTATCTTTTCCAAGGTCCACGTGGAACTGGTAAAACATCAATGGCCAGGATTTTTGCTGGTGCATTGAATTGTATAGCTCCTGATGAAACTAAACCTTGTGGCCACTGCAGGGAATGTACAAATTTCATTTCTGGGAAGAGCAGGGGCCTTTTTGAAGTTGATGGAACCAATAAAAAAGGGATTGATAGAGTTAGACATCTATTGAAAAGATTATCAGTTGGGGCTTCTTCAGCCTCCTCACCATACATGGTCTTTGTTATTGATGAGTGTCATTTGTTACCCTCTAAGACATGGTTGGCATTTCTTAAATCTCTGGAAGATCTACCTCAGCGAGTTGTGTTCATATTTATAACAACAGATATTGACCATGTGCCTCGAACAATACAATCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGCAGATATAGTAGCACGGCTAAGGAAAATATCTGCTGAGGAGAACCTGGATGTTGAAACAGATGCGTTGGATCTTATTGCTATTAATGCAGATGGCTCACTTCGGGATGCTGAAACTATACTAGAACAGCTGAGTTTACTGGGAAAAAGAATTACTACTAGTCTTGTCAACGAACTTATAGGAGTTGTTTCAGATGAAAAGTTACTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTGAAAAGGGCCAGGGAATTGATGGACTCTGGAGTTGATCCAATTGTTTTGATGTCCCAACTGGCAAGCCTCATTATGGACATGATTGCTGGATCATACGCTGTCATAGATGGCAAACCTGGTGATTCATTTTTTGGCGGACGAAGTTTGAATGAATCGGAGTTGGAGAGATTAAAGCATGCTTTGAAGCTTCTCTCGGAGGCTGAGAAACAGTTAAGGACTTCCAGTGAACGCTCAACATGGTTCACGGCTACTCTGTTACAGCTTGGTTCGATGCCTTTGCCAGATATTACTCAGACCAGCTGCAGCAGGAGGCAGAGCAGCAAGACAACTGACGATGATCCATCAAGTGCTTCAAGAGAAGTAACTGCTCACAAGCACAAGTCAGATGTTCAGGGCAGGCCTCAGAAATCAACATCACCTGCATCTCTGCAGAAAGCTGTAAATAGCAATCCCAGTCACCAAAGTAAGTTATCATCAAAGTTTGATCGTTTCAGCTTGAATTCGAAGCCATCGAATGGCCCAGTCATAGATGACGATGCCACACCTGTTTCATTTGATGATCACACAGTTAGTAATGTGACATTTAGATGCGTAGATTCAGGGAAGTTGTGTGATATCTGGGCACGTTGTATTGGAAGGTGTCACTCAAAGACGTTGAAGCAGCTGCTACATAATCATGGAAAACTTGTATCCATATGTGAAGTTGAAGGTCTGCTTGTTGCATATGTTGCATTTGGGGATGCAGATATTAAACTTAGGGCTGAAAGGTTTTTGAGCAGCATAACAAACTCCATGGAAATGGTTTTGAGACGAAATGTAGAGGTCAGAATTCTCCACTTGCTTGATGGTGAAGGTGAAGATCAGATCAATTTATCAGGCCCAAAGCAGGAAGACTCAATGATAGCAAATGAGAAGGAACATAGAGAAGGTCATACAAGAGGAAGAGATATTTCCTCAGATTTTCCTCCTTTGCTGGATGGAAACTTTCAATCTACCAATGATTCGTCAGATTTACTTATTGATGCAAATGGTATAAGAGAGAGACCAGATATTCCAATGCAAAGGATTGAATGCATTATTCGTGAGCAGAGGCTTGAAACGGCTTGGTTACAGGCTGTAGGAAAAGGCTCCCCAGGTTCATTAAGTCTCTTGAGACCTGAGAAGAATCAGGTCCTGCCTCAGGAAGGTATCTACTGTAAAGACCCAACAGAGTCCATGGACTCAACAAGGTTCTCCTCTCAGCATAGGGAAGATGACGTCAGTAATGAAGTCAAAGTTTTGAAAGCTAAAACGGGAAGGGTCCTACAGAAGGATCAGACTGGAATTGGAAGAAGGGCTGACTGTTACTCCATGTCCCCTAGTTTATTGCATGATGGGAGTTTAATAGCGACTTCCATCAGAGACAGTCTGGGATATGAATCGGGCCCAGGAGCTAGAGGTTGTAATGGGTTTTTGTGTTGGAACAACTCCAGCCGTAGAAGGGTAAAGGTAAAAGGTACCCCGGTGCGGAAAGTGGGACGCTTTTCATTGTTTGGTGAGTGTGGTAAGTCAAAGAGAAAGAGTTGA 3738 0.4286 MRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASASAWKNNGNSQLHSHLSLPSGSNNGKDKMVFLYNWKNYKSSSEKHNGDDKDEEEEEEDFDEDGGGNDESSSLLGTFEDSLSDTRNGCDSKSDTCLGVGGSTIRSSIFRCKDANPIALGTPSTRRALEIKKKSKKSKNSHSDILRQYQQREANLGKALVNPKHHIHRSIAYSREDSVGQSDDTEDYCNFEDLTRNSGPSPLLLKLKRKNWSRPNSKLLKSNRKEGSPYSTPAMSTSSYNRYGQHNPSTVGSWEGTTTSVNDADDEVDDLLVLPGRQGCGIPCYWSKKTPKHRGMCRSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSLSSSHKRTISSRSALGVLPLLTNSDHVRGSSLGTGMSDGELSTNYGELDLEGISRLDGRRWSSSCRSQEGWEIVAFNGEGDDESTPENSRSFSQKYKPMFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSMARIFAGALNCIAPDETKPCGHCRECTNFISGKSRGLFEVDGTNKKGIDRVRHLLKRLSVGASSASSPYMVFVIDECHLLPSKTWLAFLKSLEDLPQRVVFIFITTDIDHVPRTIQSRCQKYLFNKIKDADIVARLRKISAEENLDVETDALDLIAINADGSLRDAETILEQLSLLGKRITTSLVNELIGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPIVLMSQLASLIMDMIAGSYAVIDGKPGDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSMPLPDITQTSCSRRQSSKTTDDDPSSASREVTAHKHKSDVQGRPQKSTSPASLQKAVNSNPSHQSKLSSKFDRFSLNSKPSNGPVIDDDATPVSFDDHTVSNVTFRCVDSGKLCDIWARCIGRCHSKTLKQLLHNHGKLVSICEVEGLLVAYVAFGDADIKLRAERFLSSITNSMEMVLRRNVEVRILHLLDGEGEDQINLSGPKQEDSMIANEKEHREGHTRGRDISSDFPPLLDGNFQSTNDSSDLLIDANGIRERPDIPMQRIECIIREQRLETAWLQAVGKGSPGSLSLLRPEKNQVLPQEGIYCKDPTESMDSTRFSSQHREDDVSNEVKVLKAKTGRVLQKDQTGIGRRADCYSMSPSLLHDGSLIATSIRDSLGYESGPGARGCNGFLCWNNSSRRRVKVKGTPVRKVGRFSLFGECGKSKRKS 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0310 1245 Pfam DNA polymerase III, delta subunit 478 638 - -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 257 283 - -
Lele14g0310 1245 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 465 869 - -
Lele14g0310 1245 Gene3D - 454 636 IPR027417 -
Lele14g0310 1245 Pfam DNA polymerase III subunits gamma and tau domain III 692 754 IPR022754 GO:0003887
Lele14g0310 1245 CDD HLD_clamp_pol_III_gamma_tau 638 701 IPR045085 -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 86 120 - -
Lele14g0310 1245 Coils Coil 774 801 - -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 258 283 - -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 818 882 - -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 94 110 - -
Lele14g0310 1245 CDD AAA 477 635 - -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 857 882 - -
Lele14g0310 1245 SMART AAA_5 495 657 IPR003593 -
Lele14g0310 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 685 IPR027417 -
Lele14g0310 1245 FunFam DNA polymerase III subunit gamma/tau 459 637 - -
Lele14g0310 1245 SUPERFAMILY post-AAA+ oligomerization domain-like 709 810 IPR008921 GO:0003677|GO:0006260
Lele14g0310 1245 Gene3D - 639 701 - -
Lele14g0310 1245 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 463 812 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lele14g0310 1245 FunFam DNA polymerase III subunit gamma/tau 639 701 - -
Lele14g0310 1245 MobiDBLite consensus disorder prediction 830 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0310 Lele-ChrLele14 14673646 14680154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0310 459 750 Core DNA Replication Machinery Family AT1G21690 24.585 8.79e-16 78.6