Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0303 ATGGAACTTTCCAGTGAAGAAGTAGATATCCAAATCCCAATAAACAGTGCTACTAGTCATGGAGGAGGAAATAATGGCCATGGCCACCTCATCCACCACCACCATCACGAGCCTCCAATCCACCACATGATCTCTAATTCCTCAGTTCTCCCAGTAGCATCAGCCCGCCCCCATAATGGCGTCGGCGTCGGATCAGTGGGATTTGGAGTAGGAGTTGTAGCCGGAGGAGGAGGAGGAGGCAACGGGGAGAATGAGGATGATGATGATGATCAGCATCATGGTGGGCCCTACAACACCAGCGAGAAACCAGTGGTGAAGTACAGAGAATGCTTGAAGAACCATGCAGCTTCCATGGGAGGGAATGCAACAGATGGCTGTGGAGAGTTCATGCCCAGTGGAGAAGAAGGAACACTTGAAGCTCTCACTTGTTCAGCATGCCATTGCCACAGAAATTTCCACAGAAAAGAAGTTGAAGGCCACCACCATGAACAAGATCCTTATCATCTTCATCAATATCATCATCATCATCTTCATCATCCTTACAGATTATCATCAGGTACCAGAAAGCTCCTTCTTCCTCCTCCTCCTCCTGAAACCCTGGGCTACCCTACACCAGCACCACTACCACCAGGTAACATCTTACCTTCTAGAATGATCATGCCCTACAATGTCATTGGGTCCCACCACTCAGACCTATCTGATGAGCAAGAAGATCATCATCATCCCCATCATCATGGGATCATGAGGCCACATCATCATCATCATCAGAACAAGAAGAGGTTCAGAACGAAGTTCACTCAGGAGCAGAAGGAGAAGATGCTGAACTTCGCTGAGAGAGTTGGTTGGAAGATTCAGAAACAAGAAGAATCTGTTGTGCAACATTTTTGTCAAGATATTGGTGTGAAGCGAAGAGTTCTTAAGGTTTGGATGCACAACAACAAGCACAACCTCGCCAAAAAGAACAATAATCTCACAACAACTGACACAACTCCTCCTCCTCTTCCTACAACCACTAGTACTACTTCACCACCTTAA 1035 0.4676 MELSSEEVDIQIPINSATSHGGGNNGHGHLIHHHHHEPPIHHMISNSSVLPVASARPHNGVGVGSVGFGVGVVAGGGGGGNGENEDDDDDQHHGGPYNTSEKPVVKYRECLKNHAASMGGNATDGCGEFMPSGEEGTLEALTCSACHCHRNFHRKEVEGHHHEQDPYHLHQYHHHHLHHPYRLSSGTRKLLLPPPPPETLGYPTPAPLPPGNILPSRMIMPYNVIGSHHSDLSDEQEDHHHPHHHGIMRPHHHHHQNKKRFRTKFTQEQKEKMLNFAERVGWKIQKQEESVVQHFCQDIGVKRRVLKVWMHNNKHNLAKKNNNLTTTDTTPPPLPTTTSTTSPP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0303 344 SUPERFAMILY Homeodomain-like 245 319 IPR009057 -
Lele14g0303 344 Pfam ZF-HD protein dimerisation region 105 157 IPR006456 -
Lele14g0303 344 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 258 314 IPR006455 -
Lele14g0303 344 MobiDBLite consensus disorder prediction 317 335 - -
Lele14g0303 344 Gene3D - 248 320 - -
Lele14g0303 344 MobiDBLite consensus disorder prediction 229 261 - -
Lele14g0303 344 MobiDBLite consensus disorder prediction 317 344 - -
Lele14g0303 344 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 107 156 IPR006456 -
Lele14g0303 344 MobiDBLite consensus disorder prediction 244 261 - -
Lele14g0303 344 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 106 157 IPR006456 -
Lele14g0303 344 MobiDBLite consensus disorder prediction 75 101 - -
Lele14g0303 344 FunFam Zinc-finger homeodomain protein 2 247 319 - -
Lele14g0303 344 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 93 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0303 Lele-ChrLele14 14556037 14557071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0303 101 325 ZF-HD Transcription Factor Family AT2G02540 53.617 1.70e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele14g0303 ZF-HD_dimer 4.5e-29 No_clan