Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0299 ATGCTGTTTGCTTTTGAAATTTTCTACAGGGGCATTAGTTGGGAGAAATTTTGGGTCATTCTCATTTTGTGGTTCTGGGTTTTGATTCTGATTCAAACCCTCATCGGGTTCGTGCATCTGATTTTGGATTTTGTTGTGTTGGGTATTGATTCAATGGTTTTAAGATTAGAGTTTGCGGCTGTTTTGATTTGTGGGAAACTCTGTAAAACTGTGTTTGTTTTAGAGCTTTTGCATTTGGAAATTGAGAGCTTTAGGTCTGCCACTACTGTGCTTGTTCCATATGGACAAAGTTCGGTGTTAGCTGGTGATGGTGTGATTTGTTTTGAATTTTCAAATAGTCTAACCTATATTGGAACTTTTAGGATGCTTGAGGCCTCGATACATCAGGGGTCTGATCAGCAAATGCCTTCCTTCAATCTGCCTTCTAAGATTCTGTGTAAGGTTGTCAATGTTCATCTACGGGCTGAACCTGAAACAGATGAAGTCTATGCACAAATAACTTTGCTCCCTGAAGCTGATCAAAGTGAAGTGACAAGCCCTGATGATCCTCTGCCAGAGCCTCCTAGGTGCACAGTTCATTCCTTCTGCAAAATGCTTACTGCATCTGACACCAGCACTCATGGAGGTTTTTCTGTTCTTCGAAGGCATGCGGATGATTGTCTGCCACCCCTGGATATGTCTCAGCAGCCACCATGGCAAGAATTAGTTGCAATTGATTTGCATGGGAATGAATGGCATTTTCGACATATATTTCGAGGGCAACCTAGGCGCCACTTATTGACGACGGGATGGAGTGTGTTTGTAAGCTCCAAAAAATTGGTGGCCGGTGATGCTTTTATATTCCTAAGAGATGAAAATGGAGAGCTGCGAGTTGGAGTTAGGCGGCTTATGAGACAACAGAACAATATGCCATCTTCTGTCATATCCAGTCACAGTATGCATATTGGTGTTCTTGCAACTGCATCTCATGCAATTGCCACTGGAACACTGTTTTCTGTGTTTTACAAGCCCAGGACAAGCCGATCTGAGTTTATTGTTAGTGTCAACAAGTATCTTGAAGCTCGAAGTCATAAGATTTCTGTTGGGATGAGATTCAAGATGAGATTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTCAGTGGCACAATTGTGGGTGTTGGAGATAATAACTCACCTGTTTGGTCTGATTCTGAGTGGCGATCATTAAAGGTTCAATGGGATGAACCATCATCAATTTTACGTCCTGATAGAGTCTCTCCTTGGGAATTAGAGCCACTTGTGGCCACCGCTCCGGTGAACATTCAACCAGCTCAAAGAAATAAGAGGGCTCGGCTTCCTGTTCTACCCTCACCAGTACCTGATTCTTCACCGCATGGGCCATGGAAACCATCAACTGAACCTCCATCTTTCTCCTATTGTGACTCACAACATGGACAAGATCTCTATCAATCCTCTAAGTTCAATTCTACTGCAACTAACTTTCTTGGTTTTAGCGGGAACAAGTCCCTGGGGACCGCTTCCAACAATTCCATATGTTGGTCTAACAGGGTGGAGAACTCTACGGAGCATTTTTCACCTATAGCTCTTAAAGAATCTGGGGAAAAGAAACAAGGCACTGGAAACGGTTGTAGGCTCTTTGGGATTCAGCTACTTGAGAATTCCAATGTAGAAGAAAGTATGCCAAGAGTTGCTTTGTCTGAGAGGGTGGGGGATGATAGGTCAGCTCTGTGTGTAGATGCTGAGTCTGACCAGCTTTCTGAACCATCAAATGTCAATGGATCTTATATCCCATCATTGAGTTGTGATGCTGACAAATCAAGTCTTCAGTATCCTCAGGAATCACAAAGCAGGCAAATAAGGAGCTGCACTAAGGTTCACATGCAAGGAATAGCTGTTGGCAGGGCTGTGGATTTGTCACGGTTTGATGGATATGAGGATCTGCTTAAAAAATTGGAGGAAATGTTTGACATCAAGGGTGAGTTGGATAAATCCTCGAAGAAATGGCAGGTTGTCTACACTGATAATGAAGATGATATGATGATGGTTGGAGATGATCCATGGCATGAGTTCTGCACTGTGGTGAGGAAAATATTTATCTACACACCAGAGGAGGTGAAGAAGCTTTCACCCAAAATAGGGCTTCCAATCAATGAAGAAGTTAAACCAAGCAAGGTGGATTCCGAAGCAGCAGGCAATAGTGATGACCAGTCATCTACTGTGGGACCTAGCTGCTAA 2235 0.4322 MLFAFEIFYRGISWEKFWVILILWFWVLILIQTLIGFVHLILDFVVLGIDSMVLRLEFAAVLICGKLCKTVFVLELLHLEIESFRSATTVLVPYGQSSVLAGDGVICFEFSNSLTYIGTFRMLEASIHQGSDQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPEPPRCTVHSFCKMLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAIDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRDENGELRVGVRRLMRQQNNMPSSVISSHSMHIGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKISVGMRFKMRFEGDEVPERRFSGTIVGVGDNNSPVWSDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVATAPVNIQPAQRNKRARLPVLPSPVPDSSPHGPWKPSTEPPSFSYCDSQHGQDLYQSSKFNSTATNFLGFSGNKSLGTASNNSICWSNRVENSTEHFSPIALKESGEKKQGTGNGCRLFGIQLLENSNVEESMPRVALSERVGDDRSALCVDAESDQLSEPSNVNGSYIPSLSCDADKSSLQYPQESQSRQIRSCTKVHMQGIAVGRAVDLSRFDGYEDLLKKLEEMFDIKGELDKSSKKWQVVYTDNEDDMMMVGDDPWHEFCTVVRKIFIYTPEEVKKLSPKIGLPINEEVKPSKVDSEAAGNSDDQSSTVGPSC 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0299 744 MobiDBLite consensus disorder prediction 711 744 - -
Lele14g0299 744 SUPERFAMILY DNA-binding pseudobarrel domain 184 324 IPR015300 -
Lele14g0299 744 MobiDBLite consensus disorder prediction 450 464 - -
Lele14g0299 744 Pfam AUX/IAA family 617 710 IPR033389 -
Lele14g0299 744 Gene3D - 192 297 IPR015300 -
Lele14g0299 744 SUPERFAMILY CAD & PB1 domains 623 697 - -
Lele14g0299 744 MobiDBLite consensus disorder prediction 446 469 - -
Lele14g0299 744 SMART B3_2 195 297 IPR003340 GO:0003677
Lele14g0299 744 Pfam Auxin response factor 321 403 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele14g0299 744 CDD B3_DNA 193 295 IPR003340 GO:0003677
Lele14g0299 744 Gene3D - 358 431 - -
Lele14g0299 744 ProSiteProfiles PB1 domain profile. 620 713 IPR000270 GO:0005515
Lele14g0299 744 FunFam Auxin response factor 615 709 - -
Lele14g0299 744 FunFam Auxin response factor 193 297 - -
Lele14g0299 744 Pfam B3 DNA binding domain 195 295 IPR003340 GO:0003677
Lele14g0299 744 MobiDBLite consensus disorder prediction 729 744 - -
Lele14g0299 744 FunFam Auxin response factor 358 430 - -
Lele14g0299 744 Gene3D - 615 709 - -
Lele14g0299 744 ProSiteProfiles B3 DNA-binding domain profile. 195 297 IPR003340 GO:0003677
Lele14g0299 744 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 131 709 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0299 Lele-ChrLele14 14466020 14474494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0299 118 743 B3 DNA Binding Superfamily AT1G59750 69.108 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele14g0299 AUX_IAA 2.6e-12 CL0072