Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0292 ATGGATGGGAATGGAGTAGAGAGGGACCTGGAGATAGAGGGTGGTGGGGTGGCGATGATCATGGCGAATGATTATGACAAACAAGAAGACAGGGAAGACAATACATCAGAATCAGAATCAGAATCAGAATCCTTTCTCCGAGAGCCTTTGCTTCTCACGAAAAACAATAGGATGAACAACACCTCGCAGCTCGCCATTGTTGGAGCCAATGTTTGCCCTATTGAAAGTCTTGATTACGAGATCATTGAGAATGATCTATTTAAACAAGATTGGAGATCTAGAACGAAGGTCGAAATATGCCAATATATTGTTCTTAAATGGACTCTTGCACTTCTAATTGGTTTGAGTACAGGGCTTGTTGGCTTTTTTAATAACCTTGCTGTTGAGAACATTGCTGGTTTCAAGCTTCTACTCACTAACAGTCTCATGCTCAAAGAAAAGTATTATCAGGCCTTCGCGGCATTCGCTGGGTGTAACATGATTTTGGCCACTGCTGCGGCCATTCTCTGTGCCTACATTGCCCCTGCAGCAGCTGGGTCTGGCATACCTGAGGTGAAGGCCTACCTCAATGGTATAGATGCCCATTCTATATTGGCTCCAAGTACCCTCTTTGTAAAGATCTTTGGTTCAATTTTTGGTGTTGCTGCGGGGTTTGTTGTTGGTAAGGAAGGACCTATGGTACATACTGGTGCATGCATAGCCAATTTACTCGGACAAGGTGGTTCTCAAAAGTATCGCCTGACATGGAAATGGCTCAGATTCTTTAAAAATGATCGCGATCGAAGGGATTTGATCACATGTGGGGCAGCTGCAGGGGTTGCTGCTGCCTTCCGTGCTCCGGTTGGTGGTGTCCTTTTTGCGCTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTGTGGCGGACTTTCTTTACAACAGCAGTAGTAGCAGTAGTGCTGAGAGGTTTCATGGACTTGTGTCGGGGTGGAAACTGTGGTCTTTTCGGGGAAGGCGGGCTGATAATGTTTGATGTTAATGAAGCAAAGCCCGCATACAGCACCCCTGACCTCCTGGCGGTTGTATTTCTGGGTGTTGTTGGGGGCATTTTTGGAAGCCTTTACAATTACCTTGTGGACAAGGTCCTTAGCACTTATAGCATCATAAACGAGAGAGGCCCTATATTTAAAATTGTACTTGTTGTCACAATCTCCCTTTTGACCTCTTGTTGCGCATATGGCCTTCCATGGATATCAAACTGCATCCCTTGTCCTCCTAACTTGGGGGACCAGTGCCCCACCGTAGGTCGCTCCGGCCACTACAAGAATTTCCAATGTCCACGTAACCACTACAACGATCTCGCTTCTCTCGTTTTCACTACTAATGATGATGCCATCCGCAACCTCTTTATAGCAGGCACAGACAAGGAGTTTAATCTCTCTACACTTCTAATCTTCTTTGTTGCCATATACTTCCTTGGAATCATCACTTATGGAATTGCTGTTCCCTCTGGGCTATTTATTCCTGTCATACTTGCCGGGGCCTCATATGGGCGCCTTGCTGGCAGTCTTTTAAGTCCTTTCACCGTACTCGATGTTGGATTGTTTGCCCTACTTGGAGCTGCATCCTTCCTCGGTGGTACCATGAGAATGACTGTTTCTATTTGTGTCATACTCCTTGAACTCACTAATGACCTCCTTATGCTCCCACTGGTGATGCTGGTTCTTCTTGTTTCAAAGACTGTGGCAGATAGCTTCAACAGAGGTGTATATGATCAGATGGTGAAAATGAAGGGGCTGCCTTATATGGAAGCACATGCTGAACCATACATGAGGCATTTAGTTGCAAGTGATGTTGTCTCTGGCCCTCTGATAACTTTTTCTGGGATTGAAAAAGTGGGGAATATCATCCATGCTTTAAGTATTACTAGGCACCAAGGGTTTCCTGTGATCGATGAGCCTCCTTTCTCGGCTGCTCCCGAGTTGTGTGGGTTGGTTTTAAGGTCGCATCTGCTCGTGCTTCTTAAGAAGAAGAAGTTCACAAAGCAGAAGATGATGACTGGGTCTACCATTATGAGAAACTTCAAAGCGCGTGATTTCGCAAAGCCGGGATTAGGAAAGGGCCTCAAGCTCGAGGATTTGGACGTTACAAAGGAGGATATGGAAATGTATGTTGATCTCCATCCAATTACTAACACTTCACCGTATACAGTAGTGGAATCGATGTCCCTAGCAAAAGCTTCAGTTCTTTTCCGGGAGCTTGGCCTCAGGCACTTGGTGGTGGTGCCTAAGACACCTGCAAGACCTCCAATTGTTGGGATCTTGACAAGGCATGACTTCATGCCTGAGCACATTTTGGGACTATACCCTCATTTGGATCCACACAAGTAG 2370 0.4595 MDGNGVERDLEIEGGGVAMIMANDYDKQEDREDNTSESESESESFLREPLLLTKNNRMNNTSQLAIVGANVCPIESLDYEIIENDLFKQDWRSRTKVEICQYIVLKWTLALLIGLSTGLVGFFNNLAVENIAGFKLLLTNSLMLKEKYYQAFAAFAGCNMILATAAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSQKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMDLCRGGNCGLFGEGGLIMFDVNEAKPAYSTPDLLAVVFLGVVGGIFGSLYNYLVDKVLSTYSIINERGPIFKIVLVVTISLLTSCCAYGLPWISNCIPCPPNLGDQCPTVGRSGHYKNFQCPRNHYNDLASLVFTTNDDAIRNLFIAGTDKEFNLSTLLIFFVAIYFLGIITYGIAVPSGLFIPVILAGASYGRLAGSLLSPFTVLDVGLFALLGAASFLGGTMRMTVSICVILLELTNDLLMLPLVMLVLLVSKTVADSFNRGVYDQMVKMKGLPYMEAHAEPYMRHLVASDVVSGPLITFSGIEKVGNIIHALSITRHQGFPVIDEPPFSAAPELCGLVLRSHLLVLLKKKKFTKQKMMTGSTIMRNFKARDFAKPGLGKGLKLEDLDVTKEDMEMYVDLHPITNTSPYTVVESMSLAKASVLFRELGLRHLVVVPKTPARPPIVGILTRHDFMPEHILGLYPHLDPHK 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0292 789 MobiDBLite consensus disorder prediction 23 46 - -
Lele14g0292 789 Gene3D Clc chloride channel 98 596 - -
Lele14g0292 789 Pfam Voltage gated chloride channel 163 577 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 SMART cbs_1 727 778 IPR000644 -
Lele14g0292 789 SMART cbs_1 616 669 IPR000644 -
Lele14g0292 789 PRINTS Plant CLC chloride channel signature 291 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g0292 789 PRINTS Plant CLC chloride channel signature 305 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g0292 789 PRINTS Plant CLC chloride channel signature 447 463 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g0292 789 PRINTS Plant CLC chloride channel signature 80 88 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g0292 789 PRINTS Plant CLC chloride channel signature 323 330 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele14g0292 789 CDD ClC_6_like 75 596 - -
Lele14g0292 789 CDD CBS_pair_voltage-gated_CLC_euk_bac 609 776 - -
Lele14g0292 789 MobiDBLite consensus disorder prediction 24 44 - -
Lele14g0292 789 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 33 779 - -
Lele14g0292 789 SUPERFAMILY Clc chloride channel 84 598 IPR014743 -
Lele14g0292 789 SUPERFAMILY CBS-domain pair 600 774 IPR046342 -
Lele14g0292 789 ProSiteProfiles CBS domain profile. 723 787 IPR000644 -
Lele14g0292 789 Gene3D - 597 775 IPR046342 -
Lele14g0292 789 PRINTS Chloride channel signature 527 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 PRINTS Chloride channel signature 583 597 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 PRINTS Chloride channel signature 175 192 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 PRINTS Chloride channel signature 495 515 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 PRINTS Chloride channel signature 545 564 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 PRINTS Chloride channel signature 206 225 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 PRINTS Chloride channel signature 270 289 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele14g0292 789 Pfam CBS domain 725 773 IPR000644 -
Lele14g0292 789 FunFam Chloride channel ClC3 98 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0292 Lele-ChrLele14 14362205 14367317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0292 4 789 Ion Channels AT5G49890 76.493 0.0 1190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0292 14 14362205 14367317 Lele16g2202 16 17532026 17537142 hybridization