Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0273 ATGACAGCTTTTCTGTTATTTGTTCCCTTATTTCTTTTTTGCTCTTCTTCTGTTTCTGGGTACTCATGGAATGAGGTTAGGGCTTGGTGCAACCAAACCCCTAATCCTCAGTCATGCGAGTATTTTCTTAACAACAATCCCATTCACGGCCGAAAGATCATCAAACACCAACATGACTTTCTCAAGCTTTCTCTTCAACTTGCCCAAGAGCGAGCCCTCAAGGGTCATGCAAACACTCTTTCATTAGGCCCTAAGTGTAGGAACTCTCGTGAGAAAGCTGCATGGGCTGATTGCATTGAGCTTTACGAGCAAGCAATCGATAAACTCAACAAAACCCTAAACCCCAACACCAACTTCTCACAAACAGATGCTCAAACATGGCTCAGCACGGCTCTCACCAACCTCGACACATGCCGAGCCGGGTTCTACGAGCTCGGTGTTCAAGACTACGTGTTGCCTCTGATGGCCAACAACGTCACTAAGTTGCTGAGCAACACTTTGGCTCTCAACAAAGTTCAATACCAAGAAGTAGAACCAAGTTATAAAGAAGGGTTTCCAACATGGGTGAAGCCTGGAGATAGAAAGTTGTTGCAGTCATCATCTTCGTCTTCTAGGGCTAACGTTGTTGTGGCTAAAGATGGATCTGGCAAATACAAAACTGTAAGTGAGGCTATAAATGCAGCCCCAAAGAGTAGCAGTGGGAGATATGTGATATACGTGAAGGCTGGAGTTTACAACGACCAGTTCGAGATTAAGGCAAAGAATATAATGTTGGTCGGAGATGGCGTTGGGAAGACTATCATCACAGGAAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGGTCAGCCACCGTTGCTGTTGTTGGGGATGGATTCATTGCTCAAGGCATCACATTCAGAAACACTGCTGGAGCTTCAAATCACCAAGCTGTTGCCCTTCGTTCTGGTTCAGACTTATCAGTATTCTACAGATGCAGCTTTGAAGGTTACCAAGACACTTTATATGTTCACTCTGAGAGACAATTCTACAGAGAGTGTGACATTTATGGCACTGTCGATTTCATCTTTGGAAACGCAGCCGTTGTTTTCCAAAACTGCAACATTTTTGCCAGGAACCCTCCGAATAAAGTGAACACAATCACAGCTCAAGGTCGAACCGATCCGAACCAAAACACGGGAATTTCCATCCACAATTGTAGGGTTACAGCTGCTTCAGACTTAAAACCAGTTCAGAGCTCAGTGAAGACCTATCTTGGCAGGCCATGGAAGCAATATTCAAGAACAGTGTTTATGAAGACTTTCTTGGATAGCTTGATAAACCAGGCTGGTTGGATGGAATGGAGTGGTAACTTTGCGTTGAGGACATTGTATTATGGAGAGTACATGAACACAGGTTCAGGTTCTTCAACAGAAAATCGAGTTAAGTGGTCAGGTTATCACGTAATCAAAAGTGCTTCAGAAGCTTCAAAGTTCACTGTTGGAAACTTCATTGGAGGGAATTCATGGTTGCCAGTAACTCGTATGCCTTTTACCTCTGCCTTGTAA 1548 0.4432 MTAFLLFVPLFLFCSSSVSGYSWNEVRAWCNQTPNPQSCEYFLNNNPIHGRKIIKHQHDFLKLSLQLAQERALKGHANTLSLGPKCRNSREKAAWADCIELYEQAIDKLNKTLNPNTNFSQTDAQTWLSTALTNLDTCRAGFYELGVQDYVLPLMANNVTKLLSNTLALNKVQYQEVEPSYKEGFPTWVKPGDRKLLQSSSSSSRANVVVAKDGSGKYKTVSEAINAAPKSSSGRYVIYVKAGVYNDQFEIKAKNIMLVGDGVGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVTAASDLKPVQSSVKTYLGRPWKQYSRTVFMKTFLDSLINQAGWMEWSGNFALRTLYYGEYMNTGSGSSTENRVKWSGYHVIKSASEASKFTVGNFIGGNSWLPVTRMPFTSAL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0273 515 PANTHER PECTINESTERASE 13 507 - -
Lele14g0273 515 Gene3D - 201 515 IPR012334 -
Lele14g0273 515 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 172 IPR035513 -
Lele14g0273 515 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 171 IPR006501 GO:0004857
Lele14g0273 515 Pfam Pectinesterase 207 501 IPR000070 GO:0030599|GO:0042545
Lele14g0273 515 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Lele14g0273 515 SMART PMEI_2 21 169 IPR006501 GO:0004857
Lele14g0273 515 CDD PMEI-like_3 28 171 - -
Lele14g0273 515 FunFam Pectinesterase 201 515 - -
Lele14g0273 515 Pfam Plant invertase/pectin methylesterase inhibitor 25 169 IPR006501 GO:0004857
Lele14g0273 515 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 172 IPR035513 -
Lele14g0273 515 SUPERFAMILY Pectin lyase-like 202 512 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0273 Lele-ChrLele14 14045641 14047713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0273 7 515 Carbohydrate Esterase AT2G45220 68.762 0.0 731