Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0272 ATGGCAACTGTGTTCAATTCAATCTTATCATTATCATCGCTTCTTCTTCTAGTTGTTCCATTCTTGTTTTCCTCTTTGGCTTCTGCTTATTCCTTCAATGACATCAAATTATGGTGTAGCCAGACCCCTAATCCTCAACCCTGTGAGCATTTCTTGACCCAAAACCCAACCCACCAACACAAACCCTTAACCAACAAACATGATTTCTTCAAGCTTTCTCTACAGCTCGCCCGGGATCGAGCTCTGGTCAGCCATGAAAATGCGGTTTCTCTCGGTGGAAAGTGCCGGAACCAAAGGGAGAAACTTGCATGGGCTGATTGTTTAGAGTTGTATGAGCACACCATACACAAACTCAACAAAACCCTAAATCCTAACACCAAGTGCACCCAAGTTGATACACAAACATGGCTCAGCTCAGCTCTCACAAATCTTGAGGCATGTAAAGCCGGGTTTTATGAACTTGGGGTTCAAGACTATGTGTTGCCATTGATGTCCAACAATAATGTCACCAAGTTGCTGAGCAACACTTTGGCTTTAAACAAGCTTACATATGAAGAAGAAGAACCAAGTTACAAACATGGGTTCCCAACATGGGTCAAGCCCGGTGATCGGAAGCTGTTGCAGAGTTCTTCTCCGTCTTCTCAGGCGAATGTCGTGGTGGCTAAAGACGGATCCGGCCACTTCACAAGTGTTAGCGCCGCCATAAGTGCTGCAACAAAGAGTAGCAGTGGGAGGTATGTTATATACGTGAAGGAAGGAATATACAACGAACAAGTTGAAATCAAACTGAACAATATAATGTTAGTGGGAGATGGTATTGGAAAAACTATCATTACTGGTAGCAATAGTGTTGGAGGAGGCACTACTACCTTCCGTTCTGCAACTGTCGCTGTTGTTGGGGATGGCTTTATTGCTCAAGACATGACATTTAGGAACACTGCTGGGGCTTCAAACCACCAAGCTGTAGCATTACGTTCTGGTTCAGACTTATCCGTATTCTACAGATGCAGCTTTGAAGGTTACCAAGATACTTTATATGTCTTCTCTGAGAGACAATTCTACAGAGAATGTGACATTTATGGCACTGTGGATTTCCTCTTTGGAAACGCAGCTGTAGTTTTCCAGAACTGCAACCTTTTGGCTAGAAACCCTCCGAACAAAGTGAACACGATCACGGCCCAAGGTCGAACCGATCCGAACCAAAACACCGGAATTTCCATCCACAATTGTAAGGTCACAGCTGCTTCAGACTTAAATCCAGTTCAAAGCTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCAAGAACTGTTTTCATAACGAGTTTCTTAGACAGTTTGATAGATCCTTCTGGTTGGTTGGAATGGAGTGGGAACTTTGCGTTGAATACTTTGTATTACGGAGAGTACATGAACACCGGTTCAGGTTCTTCCACAACAAATCGAGTTAAGTGGTCAGGTTATCACGTAATAACCAGTGCTTCAGAAGCTTCAAAGTTCACTGTTGGAAACTTCATTGGAGGAAATTCATGGTTGCCAGCCACCAAAGTTCCTTTCACTTCTACTTTATAG 1578 0.4341 MATVFNSILSLSSLLLLVVPFLFSSLASAYSFNDIKLWCSQTPNPQPCEHFLTQNPTHQHKPLTNKHDFFKLSLQLARDRALVSHENAVSLGGKCRNQREKLAWADCLELYEHTIHKLNKTLNPNTKCTQVDTQTWLSSALTNLEACKAGFYELGVQDYVLPLMSNNNVTKLLSNTLALNKLTYEEEEPSYKHGFPTWVKPGDRKLLQSSSPSSQANVVVAKDGSGHFTSVSAAISAATKSSSGRYVIYVKEGIYNEQVEIKLNNIMLVGDGIGKTIITGSNSVGGGTTTFRSATVAVVGDGFIAQDMTFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVFSERQFYRECDIYGTVDFLFGNAAVVFQNCNLLARNPPNKVNTITAQGRTDPNQNTGISIHNCKVTAASDLNPVQSSVKTYLGRPWQQYSRTVFITSFLDSLIDPSGWLEWSGNFALNTLYYGEYMNTGSGSSTTNRVKWSGYHVITSASEASKFTVGNFIGGNSWLPATKVPFTSTL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0272 525 PANTHER PECTINESTERASE 14 517 - -
Lele14g0272 525 Pfam Pectinesterase 217 511 IPR000070 GO:0030599|GO:0042545
Lele14g0272 525 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 181 IPR006501 GO:0004857
Lele14g0272 525 CDD PMEI-like_3 37 181 - -
Lele14g0272 525 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 182 IPR035513 -
Lele14g0272 525 ProSitePatterns Pectinesterase signature 1. 242 261 IPR018040 -
Lele14g0272 525 FunFam Pectinesterase 211 525 - -
Lele14g0272 525 SUPERFAMILY Pectin lyase-like 212 524 IPR011050 -
Lele14g0272 525 Pfam Plant invertase/pectin methylesterase inhibitor 34 179 IPR006501 GO:0004857
Lele14g0272 525 Gene3D - 211 525 IPR012334 -
Lele14g0272 525 SMART PMEI_2 30 179 IPR006501 GO:0004857
Lele14g0272 525 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 183 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0272 Lele-ChrLele14 14032161 14034487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0272 16 525 Carbohydrate Esterase AT2G45220 65.490 0.0 705