Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0271 ATGATAGCGTTTCGCTTTTTCATATCTCTCGTACTTGTTCCCATCTTAGCTACCAGTTATTCTGCAGATGACATTAAGTTGTGGTGCAACCAAACCCCAAATCCTCAACCATGTGAGTATTTCTTGAGCAAGAAACCAACTTATGAACTCAAAACCATCAAACACAAAGATGATTTTCTCAAGCTTTCACTTCAACTCGTCCAAGAGAGGGCTTTGATTGGCCATGCAAATACTCTTTCTCTAGAATCAAAGTGCCATAATGCTCAAGAAAAAGCTGCATGGGCTGATTGTATTGAGCTTTATGAGCACACCATTCACAGACTCAACAAAACCCTAGACCCCATCACTAAATGCTCTCAAGATGACGCTCAAACATGGCTCAGCACGGCTCTCACCAACCTCGAGACATGCCGAGCCGGGTTCTACGAGCTCGGTGTTCAAGGCTACGTGTTGCCTCTGATGGGCAACAACGTCACTAAGTTGCTGAGCAACACTTTGGCTCTCAACAAAGTTCAATACCAAGAAGTAGAACCAAGTTATAAAGAAGGGTTTCCAACATGGGTGAAGCCTGGAGATAGAAAGTTGTTGCAGTCATCATCTTCTTCGTCTTCTAGGGCTAACGTTGTTGTGGCTAAAGATGGATCTGGCAAATACAAAACTGTAAGTGAGGCTATAAATTCAGCCCCAAAGAGTAGCAGTGGGAGATATGTGATATACGTGAAGGCTGGAGTTTACAACGAACAGGTAGAGATTAAGGTAAAGAATATAATGTTGGTTGGAGATGGCATTGGGAAGACTATCATCACTGGAAGCAAAAGTGTTGGAGGAGGCACCACAACCTTTCGGTCAGCAACCGTTGCTGTTGTTGGGGATGGATTCATTGCTCAAGGCATCACATTCAGAAACACTGCTGGTGCTAAAAATCACCAAGCTGTTGCACTTCGTTCTGGTTCAGACTTATCAGTATTCTACAGATGCAGCTTTGAAGGTTACCAAGACACTTTATATGTTCACTCTGAGAGACAATTCTACAGAGGGTGTGACATTTATGGCACTGTCGATTTCATCTTTGGAAACGCAGCCGTTGTTTTCCAAAACTGCAACATTTTTGCCAGAAACCCTCCGAATAAAGTGAACACAATCACAGCTCAAGGTCGAACCGATCCGAACCAAAACACTGGAATTTCTATTCACAATTGTAGGGTTACAGCTGCTTCAGACTTAAAACCAGTTCAGAGCTCAGTGAAGACCTATCTTGGAAGGCCATGGAAGCAATATTCAAGAACTGTGTTTATGAAGACTTTCTTGGATAGCTTGATAAACCAGGCTGGTTGGATGGAATGGAGTGGTAACTTTGCGTTGAGGACATTATATTATGGAGAGTACATGAACACAGGTTCAGGATCTTCAACAGCAAATCGAGTTAAGTGGTCAGAATTTGGAAGTACAATAATGATGGAAGAAAGACGTAGCAGCTATGAACATAACTATTGGGGTTGCAGTTTCTGA 1509 0.4268 MIAFRFFISLVLVPILATSYSADDIKLWCNQTPNPQPCEYFLSKKPTYELKTIKHKDDFLKLSLQLVQERALIGHANTLSLESKCHNAQEKAAWADCIELYEHTIHRLNKTLDPITKCSQDDAQTWLSTALTNLETCRAGFYELGVQGYVLPLMGNNVTKLLSNTLALNKVQYQEVEPSYKEGFPTWVKPGDRKLLQSSSSSSSRANVVVAKDGSGKYKTVSEAINSAPKSSSGRYVIYVKAGVYNEQVEIKVKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGAKNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRGCDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVTAASDLKPVQSSVKTYLGRPWKQYSRTVFMKTFLDSLINQAGWMEWSGNFALRTLYYGEYMNTGSGSSTANRVKWSEFGSTIMMEERRSSYEHNYWGCSF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0271 502 CDD PMEI-like_3 27 170 - -
Lele14g0271 502 SMART complete 240 418 IPR006633 -
Lele14g0271 502 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 171 IPR035513 -
Lele14g0271 502 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Lele14g0271 502 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 171 IPR035513 -
Lele14g0271 502 Pfam Pectinesterase 207 486 IPR000070 GO:0030599|GO:0042545
Lele14g0271 502 Pfam Plant invertase/pectin methylesterase inhibitor 24 168 IPR006501 GO:0004857
Lele14g0271 502 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Lele14g0271 502 Gene3D - 201 499 IPR012334 -
Lele14g0271 502 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 170 IPR006501 GO:0004857
Lele14g0271 502 PANTHER PECTINESTERASE 9 482 - -
Lele14g0271 502 FunFam Pectinesterase 201 498 - -
Lele14g0271 502 SUPERFAMILY Pectin lyase-like 202 498 IPR011050 -
Lele14g0271 502 SMART PMEI_2 20 168 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0271 Lele-ChrLele14 14003608 14006833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0271 1 480 Carbohydrate Esterase AT2G45220 67.629 0.0 678