Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0270 ATGAGAGCTTTTCTGTTATTTGTTCCCTTATTTCTTCTTTGCTCTTCTGTTTCCGGGTATTCATGGAATGAGGTAAGGGTTTGGTGCAACCAAACCCCTAATCCTCAGCCATGTGAGTATTTCCTTAACAACAATCCCATTCACAGCCAAAAGATCATCAAACACCAACATGACTTTCTCAAGCTTTCTCTTCAACTTGCCCAAGAGCGAGCTCTCAAGGGTCATGCAAACACTCTTTCATTAGGCCCTAAGTGTAGGAACTCTCGTGAGAAAGCTGCATGGGTTGATTGCATTGAGCTTTACGAGCAAGCCATCGATAAACTCAACAAAACCCTAAACCCCAACACCAAGTTCTCACAAACAGATGCTCAAACATGGCTCAGCTCGGCTCTCACCAACCTCGACACATGCCGAGCCGGGTTCTACGAGCTCGGGGTTCAAGACTACGTGTTGCCTCTGATGGCCAACAACGTCACTAAGTTGCTGAGCAACACTTTGGCTCTCAACAAAGTTCAATACCAAGAAGTAGAACCAAGTTATAAAGAAGGGTTTCCAACATGGGTGAAGCCTGGAGATAGGAAGTTGTTGCAGTCATCATCTTCTTCATCTTCTAGGGCTAACGTTGTTGTTGCTAAAGATGGATCTGGAAAATACAAAACTGTAAGTGAGGCTATAAATGCAGCACCAAAGAGTAGCAGTGGGAGATATGTGATATACGTGAAGGCTGGAGTTTACAACGAACAGGTAGAGATTAAGGCCAAAAATATAATGTTGGTTGGAGATGGCATTGGGAAGACTATTATCACGGGAAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGGTCAGCCACAGTTGCTGTTGTTGGGGATGGATTTATTGCTCAAGGCATCACATTTAGAAACACTGCTGGAGCTTCAAATCACCAAGCTGTTGCACTTCGTTCTGGTTCAGACTTATCAGTATTCTACAGATGCGGCTTTGAAGGTTACCAAGACACTTTATATGTTCACTCCGAGAGACAATTCTACAGAGAATGTGACATTTATGGCACTGTCGACTTCATTTTTGGAAACGCAGCCGTAGTTTTCCAGAACTGCAACATTTTTGCAAGAAACCCTCCGAATAAAGTGAACACAATCACAGCTCAAGGTCGAACCGATCCGAACCAAAACACTGGAATTTCCATCCACAATTGCAGGGTTACAGCTGCTTCAGACTTGAAACCAGTTCAAGGCTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCTCGAACTGTTTTCATGAAGACTTTCTTGGATAGCTTGATAAACCAGGCAGGTTGGTTGGAATGGAGTGGTAACTTTGCGTTGAACACTTTGTATTATGGAGAGTATATGAACACTGGTTCAGGTTCTTCAACAGCAAATCGAGTTAAGTGGTCAGGTTATCACGTAATCAGCAGTGCTTCAGAAGCTTCAAAGTTCACTGTTGGAAACTTCATTGGAGGGAATTCATGGTTGCCAACAACTAGTGTGCCTTTTACCTCTGCTTTATAA 1548 0.4354 MRAFLLFVPLFLLCSSVSGYSWNEVRVWCNQTPNPQPCEYFLNNNPIHSQKIIKHQHDFLKLSLQLAQERALKGHANTLSLGPKCRNSREKAAWVDCIELYEQAIDKLNKTLNPNTKFSQTDAQTWLSSALTNLDTCRAGFYELGVQDYVLPLMANNVTKLLSNTLALNKVQYQEVEPSYKEGFPTWVKPGDRKLLQSSSSSSSRANVVVAKDGSGKYKTVSEAINAAPKSSSGRYVIYVKAGVYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYRCGFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVTAASDLKPVQGSVKTYLGRPWQQYSRTVFMKTFLDSLINQAGWLEWSGNFALNTLYYGEYMNTGSGSSTANRVKWSGYHVISSASEASKFTVGNFIGGNSWLPTTSVPFTSAL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0270 515 PANTHER PECTINESTERASE 14 506 - -
Lele14g0270 515 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 171 IPR035513 -
Lele14g0270 515 Gene3D - 201 515 IPR012334 -
Lele14g0270 515 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 171 IPR035513 -
Lele14g0270 515 SMART PMEI_2 20 168 IPR006501 GO:0004857
Lele14g0270 515 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 170 IPR006501 GO:0004857
Lele14g0270 515 Pfam Plant invertase/pectin methylesterase inhibitor 25 168 IPR006501 GO:0004857
Lele14g0270 515 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Lele14g0270 515 SUPERFAMILY Pectin lyase-like 202 512 IPR011050 -
Lele14g0270 515 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Lele14g0270 515 FunFam Pectinesterase 20 171 - -
Lele14g0270 515 Pfam Pectinesterase 207 501 IPR000070 GO:0030599|GO:0042545
Lele14g0270 515 CDD PMEI-like_3 28 170 - -
Lele14g0270 515 SMART complete 240 417 IPR006633 -
Lele14g0270 515 FunFam Pectinesterase 201 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0270 Lele-ChrLele14 13996822 13998506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0270 1 515 Carbohydrate Esterase AT2G45220 69.246 0.0 739