LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele14g0261	ATGAGAGCATACCCCCGTGTTTCGTTTCCCTGCACGCCTCTGTCTGCAGTTAGCGGCCACCTCAGTCCCAAGCATCTCATCGAAGATCCTTTCTTCGCTTTTTCTCATTCCTCAGAAACTATAAATAAAGCCACCTCAAAGGAAGCAGACACGGATCAGTTGGAGAGCTCTAACGGGGAAATCTTCGCTGAAAACAATGCTTTTGAATCCCTCGTCAGCTTCTCCGATGGTCTTCAGTCTCCAAATTCTGCTACGGCAAATGGGGCTGATGTCGATAGAGATGGGGAAGAGATATTTGTGCCTCCTCTGAACTTTGCCATGGTCGATAATGGCATTTTCAGGGCGGGGTTCCCTGATTCTGCCAATTTTGGGTTCTTGAAATCTCTTCGCCTCCGCGTGGTTATATGTTTGTGCCCTGAACCATATCCAGAAGCGACTTCCGAATTTTTGAAGGCTAATGGAATAAGACTTTATCAATTTGGGATCGATGCCTTTAAGGAACCTTTTGTTAACATCCCAGAGCATACAGTGCGTGAGGCGTTGCAAGTAGTCATTGATGTTAGGAACCACCCTGTGCTAATTCATTGCAATCGAGGAAAGCATCGCACTGGATGTATCGTTGGATGCTTAAGGAGACTGCAGAGATGGTGTTTATCGTCTGTGTTTGATGAGTACCAAAGGTTCGCTGCTGCCAAAGCTAGATTGTCAGATCAGAGGTTCATTGAATTGTTTGACATTTCTAGCTTGAAGAACAATCCAATGTCGTTTTCATGCTCAAAGAACTCCCTCATCGGCCGGCAGCACAGGGACAACAGCGGCGACGACAGCCGATGTCCTTTGCTCCCACCACCTTCCACCATCGGTTCCCTCCATCATTCCATCTTCCGTCAGTTTGATTATGCAGCGAGACTCATAGAGCAGACGACAGAAACAGAAGCAACTGACGCCCATCATATGGGGGGCGACGACAGAATGCAACAGGAGGTGAATAATGGTAGAACCAGAACAGAAGCAGAGAATCAGAACATAACAAAAAGCAACAGAAGCAGAGAACCACACCCTTTCTTTGACTCCATCAGATATGGAAAGGTTCAAACAGCGGTAAAGAAAGAAGAAGGATATGACGACGGAAAGGAAGAATCAGCTGGTGACGGCGTTGGATCTCATCAGAATTCATGCTGA	1182	0.4679	MRAYPRVSFPCTPLSAVSGHLSPKHLIEDPFFAFSHSSETINKATSKEADTDQLESSNGEIFAENNAFESLVSFSDGLQSPNSATANGADVDRDGEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRVVICLCPEPYPEATSEFLKANGIRLYQFGIDAFKEPFVNIPEHTVREALQVVIDVRNHPVLIHCNRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARLSDQRFIELFDISSLKNNPMSFSCSKNSLIGRQHRDNSGDDSRCPLLPPPSTIGSLHHSIFRQFDYAARLIEQTTETEATDAHHMGGDDRMQQEVNNGRTRTEAENQNITKSNRSREPHPFFDSIRYGKVQTAVKKEEGYDDGKEESAGDGVGSHQNSC	393

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele14g0261	393	PRINTS	Plant and fungal dual specificity phosphatase signature	155	169	IPR020428	GO:0016791
	Lele14g0261	393	PRINTS	Plant and fungal dual specificity phosphatase signature	172	186	IPR020428	GO:0016791
	Lele14g0261	393	PRINTS	Plant and fungal dual specificity phosphatase signature	99	116	IPR020428	GO:0016791
	Lele14g0261	393	PRINTS	Plant and fungal dual specificity phosphatase signature	136	149	IPR020428	GO:0016791
	Lele14g0261	393	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	99	246	IPR029021	-
	Lele14g0261	393	MobiDBLite	consensus disorder prediction	364	383	-	-
	Lele14g0261	393	FunFam	probable tyrosine-protein phosphatase At1g05000	98	248	-	-
	Lele14g0261	393	Pfam	Tyrosine phosphatase family	100	253	IPR004861	-
	Lele14g0261	393	PANTHER	TYROSINE-PROTEIN PHOSPHATASE	91	253	-	-
	Lele14g0261	393	MobiDBLite	consensus disorder prediction	311	393	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele14g0261	Lele-ChrLele14	13844083	13848860	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele14g0261	92	260	Protein tyrosine phosphatase (PTP) family	AT4G03960	71.598	6.14e-93	275

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