Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0261 ATGAGAGCATACCCCCGTGTTTCGTTTCCCTGCACGCCTCTGTCTGCAGTTAGCGGCCACCTCAGTCCCAAGCATCTCATCGAAGATCCTTTCTTCGCTTTTTCTCATTCCTCAGAAACTATAAATAAAGCCACCTCAAAGGAAGCAGACACGGATCAGTTGGAGAGCTCTAACGGGGAAATCTTCGCTGAAAACAATGCTTTTGAATCCCTCGTCAGCTTCTCCGATGGTCTTCAGTCTCCAAATTCTGCTACGGCAAATGGGGCTGATGTCGATAGAGATGGGGAAGAGATATTTGTGCCTCCTCTGAACTTTGCCATGGTCGATAATGGCATTTTCAGGGCGGGGTTCCCTGATTCTGCCAATTTTGGGTTCTTGAAATCTCTTCGCCTCCGCGTGGTTATATGTTTGTGCCCTGAACCATATCCAGAAGCGACTTCCGAATTTTTGAAGGCTAATGGAATAAGACTTTATCAATTTGGGATCGATGCCTTTAAGGAACCTTTTGTTAACATCCCAGAGCATACAGTGCGTGAGGCGTTGCAAGTAGTCATTGATGTTAGGAACCACCCTGTGCTAATTCATTGCAATCGAGGAAAGCATCGCACTGGATGTATCGTTGGATGCTTAAGGAGACTGCAGAGATGGTGTTTATCGTCTGTGTTTGATGAGTACCAAAGGTTCGCTGCTGCCAAAGCTAGATTGTCAGATCAGAGGTTCATTGAATTGTTTGACATTTCTAGCTTGAAGAACAATCCAATGTCGTTTTCATGCTCAAAGAACTCCCTCATCGGCCGGCAGCACAGGGACAACAGCGGCGACGACAGCCGATGTCCTTTGCTCCCACCACCTTCCACCATCGGTTCCCTCCATCATTCCATCTTCCGTCAGTTTGATTATGCAGCGAGACTCATAGAGCAGACGACAGAAACAGAAGCAACTGACGCCCATCATATGGGGGGCGACGACAGAATGCAACAGGAGGTGAATAATGGTAGAACCAGAACAGAAGCAGAGAATCAGAACATAACAAAAAGCAACAGAAGCAGAGAACCACACCCTTTCTTTGACTCCATCAGATATGGAAAGGTTCAAACAGCGGTAAAGAAAGAAGAAGGATATGACGACGGAAAGGAAGAATCAGCTGGTGACGGCGTTGGATCTCATCAGAATTCATGCTGA 1182 0.4679 MRAYPRVSFPCTPLSAVSGHLSPKHLIEDPFFAFSHSSETINKATSKEADTDQLESSNGEIFAENNAFESLVSFSDGLQSPNSATANGADVDRDGEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRVVICLCPEPYPEATSEFLKANGIRLYQFGIDAFKEPFVNIPEHTVREALQVVIDVRNHPVLIHCNRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARLSDQRFIELFDISSLKNNPMSFSCSKNSLIGRQHRDNSGDDSRCPLLPPPSTIGSLHHSIFRQFDYAARLIEQTTETEATDAHHMGGDDRMQQEVNNGRTRTEAENQNITKSNRSREPHPFFDSIRYGKVQTAVKKEEGYDDGKEESAGDGVGSHQNSC 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0261 393 PRINTS Plant and fungal dual specificity phosphatase signature 155 169 IPR020428 GO:0016791
Lele14g0261 393 PRINTS Plant and fungal dual specificity phosphatase signature 172 186 IPR020428 GO:0016791
Lele14g0261 393 PRINTS Plant and fungal dual specificity phosphatase signature 99 116 IPR020428 GO:0016791
Lele14g0261 393 PRINTS Plant and fungal dual specificity phosphatase signature 136 149 IPR020428 GO:0016791
Lele14g0261 393 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 99 246 IPR029021 -
Lele14g0261 393 MobiDBLite consensus disorder prediction 364 383 - -
Lele14g0261 393 FunFam probable tyrosine-protein phosphatase At1g05000 98 248 - -
Lele14g0261 393 Pfam Tyrosine phosphatase family 100 253 IPR004861 -
Lele14g0261 393 PANTHER TYROSINE-PROTEIN PHOSPHATASE 91 253 - -
Lele14g0261 393 MobiDBLite consensus disorder prediction 311 393 - -
Lele14g0261 393 MobiDBLite consensus disorder prediction 311 330 - -
Lele14g0261 393 Gene3D Protein tyrosine phosphatase superfamily 98 248 IPR029021 -
Lele14g0261 393 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 258 IPR020422 GO:0006470|GO:0008138
Lele14g0261 393 ProSitePatterns Tyrosine specific protein phosphatases active site. 194 204 IPR016130 GO:0016311|GO:0016791
Lele14g0261 393 CDD PFA-DSP_Siw14 99 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0261 Lele-ChrLele14 13844083 13848860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0261 92 260 Protein tyrosine phosphatase (PTP) family AT4G03960 71.598 6.14e-93 275