Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0252 ATGGTACACAGCCTCTCTCTCTCTATTGATTCTCAAATCCACGAGATTAAGGACTTTCTTCTCACTGCCCGGAGGAAAGACGCGAGGTCAGTGAAAATCAAGAGGAGCAGAGATGTTGTTAAGTTCAAGGTTCGATGTTCCAAGTACCTCTACACACTCTCTGTGTTTGACCCAGAGAAGGCTGATAAATTGAAGCAATCACTTCCTCCAGATGAACCAGTGATCACTCTTGGAAATTACTATGATTTGAAAAGTTTGTTATTTGATCTTCACCATTGTAATCTGTTTATTATTTGCAGGTTTGAGCGTTCAAGACCTGTGAAACTACTGAGTGTTGTTGCAAATGGCTTGCATTTTTCTTCTAGTTTTCTGATGTCTTTTTCTATGTAG 390 0.3974 MVHSLSLSIDSQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLSVFDPEKADKLKQSLPPDEPVITLGNYYDLKSLLFDLHHCNLFIICRFERSRPVKLLSVVANGLHFSSSFLMSFSM 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0252 129 FunFam 60S ribosomal protein L38 9 77 - -
Lele14g0252 129 Pfam Ribosomal L38e protein family 12 75 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lele14g0252 129 PANTHER 60S RIBOSOMAL PROTEIN L38 11 74 IPR002675 GO:0003735|GO:0005840|GO:0006412
Lele14g0252 129 Gene3D - 10 77 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0252 Lele-ChrLele14 13603149 13604539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0252 12 70 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.525 1.02e-33 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0252 14 13603149 13604539 Lele15g2185 15 15761451 15762937 hybridization
Lele14g0252 14 13603149 13604539 Lele16g2162 16 16914274 16915609 hybridization