LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele14g0200	ATGGAACAGTACGAGAAAGTCGAGAAGATTGGTGAAGGCACCTATGGTGTGGTCTACAAGGCTCGAGATCGCATCACGAATGAGACCATAGCATTGAAGAAAATTCGATTGGAACAGGAAGATGAGGGAGTGCCTAGCACTGCGATTCGAGAGATTTCGCTCTTGAAAGAAATGCAGCATAGGAATATTGTTAGGTTACAGGATGTAGTACACAGTGAGAAGCGTTTGTACCTGGTTTTTGAGTACCTGGACCTGGATCTGAAGAAGCACATGGATTTGACTCCTGATTTTGCAAAAGATCATCGGCAAATAAAAATGTTTCTTTATCAAATTCTCTGTGGCATCGCTTACTGTCATTCACATCGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGAAGTAATTCACTGAAGCTTGCAGATTTTGGCTTGGCCAGGGCATTTGGTATTCCTGTCAGAACATTTACACATGAGGTGGTGACACTATGGTACAGAGCACCAGAAATATTGCTTGGATCTCGCCAGTATTCTACCCCAGTTGATGTATGGTCAGTAGGCTGTATATTTGCAGAGATGTTGAACCAACGACCACTATTTCCTGGAGACTCTGAGATTGATGAATTGTTTAAGATATTCAGGATCATGGGTACGCCAAATGAGGATACATGGCCTGGAGTGACTTCTTTGCCTGATTTTAAATCAGCCTTCCCAAAGTGGCCCCCAAAGGACCTGGCAACTGTGGTTCCAAATCTTGAGCCAGCTGGCATCGATCTTCTTTCTAGCATGCTTTGCTTGGATCCCAGCAGAAGAATTACAGCCAGGAACGCTCTTGAGCATGAGTACTTCAAAGACATCAAATTTGTACCCTGA	885	0.4373	MEQYEKVEKIGEGTYGVVYKARDRITNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDLTPDFAKDHRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRSNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMLNQRPLFPGDSEIDELFKIFRIMGTPNEDTWPGVTSLPDFKSAFPKWPPKDLATVVPNLEPAGIDLLSSMLCLDPSRRITARNALEHEYFKDIKFVP	294

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele14g0200	294	SUPERFAMILY	Protein kinase-like (PK-like)	1	290	IPR011009	-
	Lele14g0200	294	Pfam	Protein kinase domain	4	287	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g0200	294	CDD	STKc_CDK1_CdkB_like	4	287	-	-
	Lele14g0200	294	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	123	135	IPR008271	GO:0004672\|GO:0006468
	Lele14g0200	294	FunFam	Cell division control protein 2 homolog	86	292	-	-
	Lele14g0200	294	SMART	serkin_6	4	287	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g0200	294	ProSitePatterns	Protein kinases ATP-binding region signature.	10	33	IPR017441	GO:0005524
	Lele14g0200	294	PANTHER	CELL DIVISION PROTEIN KINASE	2	287	-	-
	Lele14g0200	294	Gene3D	Phosphorylase Kinase; domain 1	1	84	-	-
	Lele14g0200	294	Gene3D	Transferase(Phosphotransferase) domain 1	94	292	-	-
	Lele14g0200	294	ProSiteProfiles	Protein kinase domain profile.	4	287	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele14g0200	294	FunFam	Cell division control protein 2	1	84	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele14g0200	Lele-ChrLele14	11645309	11662925	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele14g0200	1	294	Core Cell Cycle Gene Families	AT3G48750	85.714	0.0	530

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-Pl	Lele14g0200		Pkinase	1.3e-80	CL0016