Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0102 ATGCCCAATTGTTCTCACGGTAAATTGGATGATGAGCATAACAATATGAGAAGGTGTGATCTCATTACTCAAAAGAATTATAATAGGGCTAGCTCATGGTATACAAAAAGGATATTCCCAGGCTGCAGTGGCATCTATAAATATAGGAGATCAAAGAGAACAAGCTGGCTAGTTGTTAGCTCTTTGTGTATGCAGTATCAGAGCCAAAACTCCATTAACCAAACCTTGAGCGGTAAAAGGGTAATCAGAAACAAGTTTTTTGTTCTTGACAGCGAAATGGCCGCAGCAGATGCAATTTCTGTAACTGTACCAGCACAAGAACTTCAGAGAGTTCTTTCGGCTCAGTTTCGGAGGCCTAACCTTAATCTTATAGATCATACACAAGAGAGAAGAGAAAACTACCTTAAGCTATGTGTTCCCCTTTACAAAGCAGCACAGAAAGGTGATTGGAAAGAAGCAAAGCAAATCTTAGACAAAGAACGGAGTCTAGTTCGCGCCGCCTTAACCAAGGGGTGGGCCACGGTGCTCCATGTGGCGGCCGAAGCGAACCGCGTTCCCTTTGTGGAGGAGCTGGTGATGAAGATGATGGATCCACCAGACTTGGAATTGCAAGATTCAATTAATAACACTGCCTTCTGCTTGGCTGCAGCAACTGGGAATGTGCAGATTGTTGATATCATGCTGAGAAAAAATTCGAACTTACCAACAATAAGAGGTGCTAAAGGACTAACTCCTCTTCACATGGCTGCTTTACAAGGAAAAAGTGAAATGGCTCGACATCTATACCCATTAACTGTTCCTGAGGTTTTCCATGAAAATACTGATTGGGTCATACTGCTCTTCTGTTGCGTCAACAGTGGAATCTACGATTTAGCCTTGAAGGTGCTAAAGAAGAAGCCAGATCTAGCTTTTGAGAGGGATAGTCCAAACGAAGAGACAATATTGCATATATTGGCTCGAAAGCCTTTAAGTTCTATGAGGTCCTGTGTGATGCAAACCCAGAAACTTCAACTAGTAAAGTACTTGTGGAGAATATTCCTTAAACACGATGATCGTAAGATTATGAATACTATACGAGTGCCTTCACAAGTAACGTTTAATGCTTTAGAAGTTGGGAATTTTGAGTTTCTAGCTGAGCTTATAAGCAACTATCCTGATTTGATATGGGAAGTTGATGAAAGAAATCGAAGCATAATTCATGTTGCAGTATTGAATCGTTATGCTGAGATCTTCAATCTCATACATGACATTGGCCCAACCAAAGATTTCATAGCAGGTTTTGAGGTTGAAGAAGATAAAGGCAGCTTATTGCATATGGCTGCTAGAATGGCACCACCAGATCGGTTAAACCTAGTTTCTGGAGCGGCTTTCCATATGACCCATGAGTTGATATGGTTTGAGGAGGTGAAGAAGATTGTGCCACCATCGTTAATAGACAAGAAGAATAAATATGGCTTGACTCCTCGCCAACTATTCACAGAAGAGCATAAAGAGTTACTTAGCGAAGCAGAATCATGGATGAAGAAAACAGCAGAATCATGCATGGTTGTTTCAACTCTCATTACTACTGGAATGTTTACAGCTGCATTCAGTATACCAGGTGTGTATTGGGCTATGATGTCTGTTGCAGTATATTCTGGAAACCAGAACGCCATGGAAATTGGTGTGCTTACTGGTTATTCATTGCTTGCCACTGCCCTCGCTCTTCCCCAAGATGGCAAGGAGAAGAATCATGGAAGCTTCGATTTCATATTTGTGCACGCTGACAAGGACAATTATGTTAACTATCACAAGAGGCTGATCGAGCTGGTGAAGGTTGGGGCTGTGATCGGCTACGACAATACACTATGGGGAGGCTCTGTCGTGGCATCACCCGATTCGTCTATAGATGAGTACATCATGTCGTATAGAGACTTTGTATTGGAGCTCAACAAGGCTCGCTGTGGACCCTAG 1953 0.4229 MPNCSHGKLDDEHNNMRRCDLITQKNYNRASSWYTKRIFPGCSGIYKYRRSKRTSWLVVSSLCMQYQSQNSINQTLSGKRVIRNKFFVLDSEMAAADAISVTVPAQELQRVLSAQFRRPNLNLIDHTQERRENYLKLCVPLYKAAQKGDWKEAKQILDKERSLVRAALTKGWATVLHVAAEANRVPFVEELVMKMMDPPDLELQDSINNTAFCLAAATGNVQIVDIMLRKNSNLPTIRGAKGLTPLHMAALQGKSEMARHLYPLTVPEVFHENTDWVILLFCCVNSGIYDLALKVLKKKPDLAFERDSPNEETILHILARKPLSSMRSCVMQTQKLQLVKYLWRIFLKHDDRKIMNTIRVPSQVTFNALEVGNFEFLAELISNYPDLIWEVDERNRSIIHVAVLNRYAEIFNLIHDIGPTKDFIAGFEVEEDKGSLLHMAARMAPPDRLNLVSGAAFHMTHELIWFEEVKKIVPPSLIDKKNKYGLTPRQLFTEEHKELLSEAESWMKKTAESCMVVSTLITTGMFTAAFSIPGVYWAMMSVAVYSGNQNAMEIGVLTGYSLLATALALPQDGKEKNHGSFDFIFVHADKDNYVNYHKRLIELVKVGAVIGYDNTLWGGSVVASPDSSIDEYIMSYRDFVLELNKARCGP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0102 650 Pfam O-methyltransferase 574 646 IPR002935 GO:0008171
Lele14g0102 650 ProSiteProfiles Ankyrin repeat profile. 241 261 IPR002110 GO:0005515
Lele14g0102 650 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 537 639 IPR029063 -
Lele14g0102 650 Gene3D Vaccinia Virus protein VP39 573 648 IPR029063 -
Lele14g0102 650 SUPERFAMILY Ankyrin repeat 140 420 IPR036770 -
Lele14g0102 650 SMART ANK_2a 241 271 IPR002110 GO:0005515
Lele14g0102 650 SMART ANK_2a 394 423 IPR002110 GO:0005515
Lele14g0102 650 SMART ANK_2a 171 200 IPR002110 GO:0005515
Lele14g0102 650 SMART ANK_2a 207 236 IPR002110 GO:0005515
Lele14g0102 650 SMART ANK_2a 136 165 IPR002110 GO:0005515
Lele14g0102 650 ProSiteProfiles Ankyrin repeat region circular profile. 241 261 - -
Lele14g0102 650 Gene3D - 124 363 IPR036770 -
Lele14g0102 650 PANTHER CASKIN 169 549 - -
Lele14g0102 650 Gene3D - 364 498 IPR036770 -
Lele14g0102 650 Pfam Domain of unknown function 505 540 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0102 Lele-ChrLele14 2661306 2674738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0102 537 646 Monolignol Biosynthesis Gene Families AT4G34050 48.485 2.45e-41 150