Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0071 ATGTCCAATAATCAAATCACTCTTCACGGACAACCATCAATATTTGAAATTGATCAAGGTGGAAATTTTGGACGTGAAATAATTCGAGCTGTGCTTCGCGATAGTCAAGGTAATCTACGTACAATCTATGTTTCAAGAAGCCAATATGAACAAATGTTTGGAGAAGTAAATCTAGAAGGAGAAGAAGAAGAGGAAGAGGATGACGAAGACGAAGACGAAGAAATAGAAGATGACAAAAATCATCAGAAGTCAATAGAAAATTTAGAGAAGGTCAAGATTGAAGAGTCTACAATGTGTTCGATATGTTTTGAAGAGATTACTTCAACGAATGAGAGAGAAGAAAAGGAAGAAGGAGGAGGAGGGGCAGTTCGAATTCCTAAACCTTGTAGTCATGTATATCACCATAAGTGCATATCCAAATGGCTCATCAACCACAATACTTGTCCTCTGTGTCGCTACAAGATTACAAGTTAA 474 0.3713 MSNNQITLHGQPSIFEIDQGGNFGREIIRAVLRDSQGNLRTIYVSRSQYEQMFGEVNLEGEEEEEEDDEDEDEEIEDDKNHQKSIENLEKVKIEESTMCSICFEEITSTNEREEKEEGGGGAVRIPKPCSHVYHHKCISKWLINHNTCPLCRYKITS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0071 157 MobiDBLite consensus disorder prediction 53 87 - -
Lele14g0071 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 157 IPR013083 -
Lele14g0071 157 MobiDBLite consensus disorder prediction 56 76 - -
Lele14g0071 157 Coils Coil 58 78 - -
Lele14g0071 157 ProSiteProfiles Zinc finger RING-type profile. 99 152 IPR001841 -
Lele14g0071 157 SMART ring_2 99 151 IPR001841 -
Lele14g0071 157 Pfam Ring finger domain 98 152 IPR001841 -
Lele14g0071 157 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 60 154 - -
Lele14g0071 157 SUPERFAMILY RING/U-box 87 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0071 Lele-ChrLele14 1423050 1423523 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0071 83 156 C3H Transcription Factor Family AT2G03000 35.135 6.28e-11 57.8