Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0067 ATGTCTAATGGTCAAACAACTCTTCACGGAGGGCCATCAATATTTGAAATTGATCAAGGTACAACTTTTGGACCTAAAATAGCTCAAGTTCTATTTATGGATAATCAAGGTCGTGAATATATGGTATCTGCATCAAGAAATCAATTCAAAGAGATGTTGGAAGAAGCAAATTCAAAGGAAGAAGGGGAAGAGGATGACAATAACGATAAAGATGATAATAATGATGAAGAAACAGAAGACAAAGATGAAGAAATAGAAGATGACAATGATGAAGAAACAGAAGATGATGACGATAGCTACGAGGAAGATGATGACAGTGATGAAGAAACAGAAGATGATGATGATAGCTACGAGGAATATGATGGCAGTGATGAAGAAACAGAAGATGATGATGATAGCTACGAGGAAGATGATGATAGTGATGAAGAAACAGAAGATGATGATGATAGCTACGAGGAATATGATGACAGTGATGAAGAAACAGAAGATGATGAAGATAATGATAGTGAAGAAGAAACAGAAGATGAAGAAGAAGAAAATTATCAAAATTTAATAGAAAAATTAGAAAAAGTGGTTATGATAGAAGAGTGTACAATGTGTTCAATATGTTTGGAGAATATTACTCCATCAAACAAAAGAAAAGAAGAAGATGATGATGATGAAGGAGGAGGAGAAGCAGTTGAAATTCCTAAGCCTTGTGGCCATATATATCACCATAAGTGCATCCTCAAATGGCTCATCAACCACAATACTTGTCCTCTGTGTCGTTACAAGATTACGAGCTAA 786 0.3499 MSNGQTTLHGGPSIFEIDQGTTFGPKIAQVLFMDNQGREYMVSASRNQFKEMLEEANSKEEGEEDDNNDKDDNNDEETEDKDEEIEDDNDEETEDDDDSYEEDDDSDEETEDDDDSYEEYDGSDEETEDDDDSYEEDDDSDEETEDDDDSYEEYDDSDEETEDDEDNDSEEETEDEEEENYQNLIEKLEKVVMIEECTMCSICLENITPSNKRKEEDDDDEGGGEAVEIPKPCGHIYHHKCILKWLINHNTCPLCRYKITS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0067 261 SUPERFAMILY RING/U-box 199 260 - -
Lele14g0067 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 261 IPR013083 -
Lele14g0067 261 MobiDBLite consensus disorder prediction 43 181 - -
Lele14g0067 261 ProSiteProfiles Zinc finger RING-type profile. 200 256 IPR001841 -
Lele14g0067 261 Pfam Ring finger domain 199 256 IPR001841 -
Lele14g0067 261 SMART ring_2 200 255 IPR001841 -
Lele14g0067 261 Coils Coil 46 73 - -
Lele14g0067 261 Coils Coil 167 191 - -
Lele14g0067 261 MobiDBLite consensus disorder prediction 58 181 - -
Lele14g0067 261 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 114 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0067 Lele-ChrLele14 1368407 1369192 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0067 185 261 C3H Transcription Factor Family AT5G01980 32.099 1.38e-10 59.3