Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0064 ATGAGTGAGAGTGGGGAGAAACCTGCATGGCTAGAGAGGCTCATGGCGGAGACATTCTTTGGTGGGTGTGGGGTCCACCAGAATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCTCACTGTCTCTCTTCTCATCCCTCTCATCCTCTTCTCCAGGTGAGAAGGTATGTGTACCACGACGTCGTTCGACTGGGTGATCTGGAAAAGCTCATTGATTGTTCCAATATTCAGAGGCCACAGTCACGGCCATGCAAAGGCCCAGCCAATGCTTGCTGTACCTGCGATCGCATTCTTCAGGACCCTTTCCTCTTCTGTTCTCTCTCTTGCAAGGTGGATCACATGGTGGAGGAAGGGGAGGACCTGTCCGGCATTTTGCACCGATTCTGTGATTCCGACTTAGCCTTCTCCAACTTCGACGCCACCTCCTCCGACCAGGATTCCCAAATTGCCCCTCCCTCCTCCTACGGCTCCTCTGGCAACTCTGTCATTTCACCTCTCCGCCTCCCCCGCATAGTCCTCTCCCTGGGCGGCAGAAGAAAGGGCGCCCCTCAACGGGCCCCCCTCTCCTAA 594 0.5522 MSESGEKPAWLERLMAETFFGGCGVHQNRRKNEKNVFCLHCCLSICPHCLSSHPSHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQRPQSRPCKGPANACCTCDRILQDPFLFCSLSCKVDHMVEEGEDLSGILHRFCDSDLAFSNFDATSSDQDSQIAPPSSYGSSGNSVISPLRLPRIVLSLGGRRKGAPQRAPLS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0064 197 Pfam PLATZ transcription factor 92 119 IPR006734 -
Lele14g0064 197 Pfam PLATZ transcription factor 62 85 IPR006734 -
Lele14g0064 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0064 Lele-ChrLele14 1321137 1325357 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele14g0064 PLATZ 1.5e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0064 14 1321137 1325357 Lele14g0064 14 1321137 1325357 ECH
Lele14g0064 14 1321137 1325357 Lele15g2378 15 27964201 27968690 hybridization
Lele14g0064 14 1321137 1325357 Lele16g2335 16 23621014 23625092 hybridization