Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0058 ATGGAACAGGGCCTTTGCAGCCGCCTTTATGCATCTGATTACTCGGGTTCAAACGGCATGATTATGTTTTTCAATACAGCATCTATCTTTTCTTTTTCAAATATTAAAAGCGTTGATATTCCTGTATGCTTTACAACAGGAAATATTTCATTTCAGGATCAGAGTCATCCTGGCTATATGCAGTCTACTTTTGTTAGTGGGTGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATTCAGGAGCAACTATACGAAGGATTGACTACTGGCTTCTTGCCAGTTGAGCTTCCAGTGTATCCTGTGATCAATGGAACATTAATGAACGCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGATTCATATATCTGAGCATGAGTAGCTCAGTCATAACCATGCCTACAGGTTGCTCCACATCATCTGGTAAGGATATGACATCATATAGACAAGGATCCTTTGAGCATGCTCCTCCTGTAGCTGTCAACCTTGATTCACAGGCAGTTTCCCTGTCACATGTCAACAACACCAGTAAGCAATTCTTGACATCGAGGTCAAAGTTACATGAAGAACTCTGTTGGCTTTATGAGGATGAAAAGGGAATGAAGAATGGACCACATTCCATTTTGGAATTAATTTCCTGGCATGATTATGGACATCTCCGAGATTCATCAGTGATTCATCATACTGAAAATAGGTGTAGCCCCTTTGTCCTTTTGTCTGCTATAAATGCATGGAAAACAGGGAAGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACAGGGCTTGTAGTGATACCAGAAGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAGCTGCATTCCGGAGTCATGAAAACTGCCCGCAGGGTGGTGTTGGATGAGATTATTAGTAACACCATTGCAGAATTTGTTACTGAAAAGAAATGTCGGAGGCATAAACTTGACTCAGTTGATCAGCCTTCTGAGATTAGCTTGTTAGGCTGCAGAATGACTGAGGCTGATCTGGAGATGAGAAAAGGTACTGTTCTTACAAGTGAGCCAGCATCTTCCCAAATGCTTGATGATCAGTCTTCTTGTGACGATTCCAGGGTGTCTTCGACAAGCGCTAAATCAGTTGGAAGCATTGAAAACTTTTGGTGGTCATATGCTGTTTTTCGTAAAGTTCTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTGGTTTATGATTCTATGGCGGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGGCTATTTGTCCTAAGCCTCAACCATCTATTAATGGATGTGAAGATTATGGTGGAATGATCACATCAGAAGAAGCTTTGCTTCCCAGGCCAGGTTCCCCTAAACATGATGCTCTTCGGCATCCTCATTGTAAAGGGGTGGCAATGGAGAGAGACTATCTTAGTCAATCGGCTTCTATGTCTTCTGTTGTCTTGAAAGATGGAAACATTTCAGAAAATGGAAGAGTGTCATGTTCTGATCGTGATCGTATAGATTTCATATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTCAATGTTGGTGGCATCTTTAACTGAACACATTAAAAGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAATTGTCCTGAAGAAGACAACTTGAGCGAGGTTTCTATGAAACAAGGAAATTGTCTTCGAGATTCCATATCTGGAAACCATACGTCTACTTTATTCTCAAGTGCGTTTCAGGAGTTGCATGCCAATGTAGGTGATGTGGTTACTGAAAAGGAGATTGGTGACATATCACCTCCTGGATGTGACAAGAATTCAAAAACTATTGTCCCACACTTCAATTATAAGTATCGACCTTCAAGATTAGTAGAAAGTGTTCCTAAGATAACAAAATATGTTACGACAGCCCTATGCCGACAGAAGTTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTTGTTTCTTGATGCTGCATTCAATCGAGTTTTTGCATCATTCTGCACTACAAAGAAAGTCAGCAAGCCTGATGGTTACATGGAAGGAAAATTACTGTATTCATCTGAGGAACATTGGAACGATCCAACTCTGGTAAGAATGAAGAAAATACCCAAGAATTCTTCATCAGAAGATTCTCTGATGTTTGGGAAATATACATATCATCGCAAGAAGCTGCCACAGAAAGACCTAGGTTCTTCTCAACCCATAGCTGTGCCTGTCAAAAAACAAGTGGATAAGAAGAAGAAACATGTTTCTGGGGATTTGGATGAGTCTGCCAAAGTTGGAATATCTCCTGATAAAACTTCGCAGCGTAAGCTGATAAAAGAGAAGAAGGATAAACAAGCTAATGGAAAATCTCTTGCTGTCAGTGCTAAAAGAAACTTGAAGAGTAAGAAATCATCTACAAATAATGCGACTAGTAAAAAATTATTGAAGCATTCACAGGCAGTCCAAGATGATGTTAAGGATGATGAGAAAAGTAAAGGAGAGAAGATTTTAGCTGTTGTAGAACATAGTGTTGGCAAGAAGTTAGTTGATAGAAATGCTCGTGATGGTGCCATTCATGGAAAGTCCACTCTTCACTGCTCCAGGGAAACTCTTAACTCAACCAATAAAGTATCAAAACCAAAAAGGAAGCATCTAACAGATGATGGGCCATCCTCACGTCCTTCAAAGGCTTTGAAAATTGCTTATGATGGTTCAAAGGGTGGAGTTGGTGGACACTCCGCATCAAAGACAAAATCTGCCAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGATGTGCCAGGACTTCTATCGATGGGTGGAAATGGCATAAATGGTCTGTGAATGCCTGTTCTGCTGATAGAGCACGAGTTAGGGGTACACTGAGTGTTCAAAAGAACTGTATACCATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGCCTTTCTGCACGCACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCGAGGAAAAAACATTTACGTTTTCAAAGAAGTACAATACATGACTGGGGTATTGTTGCCTTGGAGTCAATTGAGTCTGAGGACTTCGTGATTGAATATATTGGAGAACTAGTCCGGCCTCGGATATCTGATATACGTGAACGTCAGTATGAAAAGATGGGAATTGGCAGCAGTTACTTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAATCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGTCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCTTTGGAGGAGAATAAGATTCCCTGCAACTGTGGGTCCAAAAGGTGTCGTGGATCACTGAATTAG 3480 0.4009 MEQGLCSRLYASDYSGSNGMIMFFNTASIFSFSNIKSVDIPVCFTTGNISFQDQSHPGYMQSTFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPVELPVYPVINGTLMNAVPLNYFKQFPDHVSTGFIYLSMSSSVITMPTGCSTSSGKDMTSYRQGSFEHAPPVAVNLDSQAVSLSHVNNTSKQFLTSRSKLHEELCWLYEDEKGMKNGPHSILELISWHDYGHLRDSSVIHHTENRCSPFVLLSAINAWKTGKFENICRSDSKSDRACSDTRSFIYEISEDISSQLHSGVMKTARRVVLDEIISNTIAEFVTEKKCRRHKLDSVDQPSEISLLGCRMTEADLEMRKGTVLTSEPASSQMLDDQSSCDDSRVSSTSAKSVGSIENFWWSYAVFRKVLCDYCMQVMWNAVVYDSMAEYIHNWRKRKLWAICPKPQPSINGCEDYGGMITSEEALLPRPGSPKHDALRHPHCKGVAMERDYLSQSASMSSVVLKDGNISENGRVSCSDRDRIDFICILESVENELHSMLVASLTEHIKSLVDKEVKRLFNCPEEDNLSEVSMKQGNCLRDSISGNHTSTLFSSAFQELHANVGDVVTEKEIGDISPPGCDKNSKTIVPHFNYKYRPSRLVESVPKITKYVTTALCRQKLHSEVLEEWKSLFLDAAFNRVFASFCTTKKVSKPDGYMEGKLLYSSEEHWNDPTLVRMKKIPKNSSSEDSLMFGKYTYHRKKLPQKDLGSSQPIAVPVKKQVDKKKKHVSGDLDESAKVGISPDKTSQRKLIKEKKDKQANGKSLAVSAKRNLKSKKSSTNNATSKKLLKHSQAVQDDVKDDEKSKGEKILAVVEHSVGKKLVDRNARDGAIHGKSTLHCSRETLNSTNKVSKPKRKHLTDDGPSSRPSKALKIAYDGSKGGVGGHSASKTKSAKSKPLNLCPRSDGCARTSIDGWKWHKWSVNACSADRARVRGTLSVQKNCIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKHLRFQRSTIHDWGIVALESIESEDFVIEYIGELVRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKRCRGSLN 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0058 1159 CDD SET_SETD1 1008 1155 - -
Lele14g0058 1159 SUPERFAMILY SET domain 1015 1156 IPR046341 -
Lele14g0058 1159 MobiDBLite consensus disorder prediction 794 819 - -
Lele14g0058 1159 MobiDBLite consensus disorder prediction 776 790 - -
Lele14g0058 1159 MobiDBLite consensus disorder prediction 862 928 - -
Lele14g0058 1159 Gene3D - 184 276 IPR035445 -
Lele14g0058 1159 ProSiteProfiles Post-SET domain profile. 1143 1159 IPR003616 -
Lele14g0058 1159 SUPERFAMILY GYF domain 196 250 IPR035445 -
Lele14g0058 1159 SMART PostSET_3 1143 1159 IPR003616 -
Lele14g0058 1159 ProSiteProfiles SET domain profile. 1020 1137 IPR001214 GO:0005515
Lele14g0058 1159 ProSiteProfiles GYF domain profile. 198 248 IPR003169 GO:0005515
Lele14g0058 1159 MobiDBLite consensus disorder prediction 820 835 - -
Lele14g0058 1159 Pfam SET domain 1032 1136 IPR001214 GO:0005515
Lele14g0058 1159 MobiDBLite consensus disorder prediction 733 835 - -
Lele14g0058 1159 Gene3D SET domain 917 1159 IPR046341 -
Lele14g0058 1159 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 744 1159 IPR044570 GO:0042800|GO:0051568
Lele14g0058 1159 SMART set_7 1020 1143 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0058 Lele-ChrLele14 1011891 1020952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0058 1022 1159 C2H2 Transcription Factor Family AT2G23740 38.125 4.65e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele14g0058 SET 7.8e-21 No_clan