Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0045 ATGGTTTCTTCTTTGCCTCTTTCTCAGCCTACTACTAGTCACACCTTCTTCTCTAAAACCCAGTTGAGAGGATTTGGCCATGGCTCCCGGCGACCCAGCTTCTCATTTTGCCGCGACTCGGAAAGCAAAGTTCGACCCATCAAAGCTTCGGTTGATACAGCCCCATTCCCCTTGTTCCAACATCCCAAAGTTGAAGAGTCGTTGTCTGAGTTGGAGCCAGCAGACCCAGATTTCTACAAGATAGGTTATATTCGAAGCATGCGAGCTTATGGAGTTGAGTTTAAGGAAGGGCCTGATGCGTTTGGTGTGTATGCTTCTAAAGATGTAGAACCTCTTCGCCGAGCCAGGGTTATTATGGAAATTCCTCTTGAATTGATGTTGACCGTGAGTCATAAGCCCCCATGGATGTTCTTCCCTGATATAATTCCAGTGGGACATCCAATATTTGATATTATCAACTCAACTAATCCAGAGACAGATTGGCACCTAAGATTAGCATGCCTGCTGTTATATGCACTGGACTGTCAGGAAAACTTTTGGCAGTTGTATGGTGACTTCTTACCCAGTGCTGATGAATGCGCTAGCCTACTTCTGGCAACAGAGGAGGAACTTTTGGAGCTGCAAGATCCAAATCTTGCTTCTACCATCAGGTACCAGCAACGTCATGCCTTGGAATTTTGGGAGAAGAATTGGCACAATGGCGTTCCCCTTAAAATAAGGCGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGTATAGCACAATCACGATGCATTAACCTGAAAATGAGGCTTGGGGCACTACATCAGGATGCAAATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTCGAGCCAAATTGCTTTTTCCATTGGCGCTTCAAGGACCGAATGCTTGAGGTTCTCATAAATGCTGGACAGAGGATTAGAAAGGGAGATGAGATGACGGTTGATTACATGAGCGGACAAAAGAATGACATGTTTATGCAAAGATATGGCTTCTCATCATCAGTGAATCCTTGGGATGAGATCAAATTCTCTGGAGATGCGCGTATACATTTGGATTCCTTCTTGTCAGTGTTCAACATATCTGGCCTTCCTGAAGAGTATTATCATAACACTCTACTATCTAACGAGGGCAATACTTTTGTCGACGGAGCAGTCATAGCCGCAGCACGAATGCTGCCAACTTGGTCAGATGGGGATGTACCTCCAATCCCTAGTGTTGAACGGAAGGCTGTGAAGGAGTTGCAAAATGAATGCCAACAAATGCTTGCAGAATTTCCCACAACCTCCGAGCAAGACCAAAAATTGCTAGATTCATTGCAAGATTCTACCAGGACTCTTGAAGCTGCAATAAAGTACGTCAATTTCACATATCATCTTGAAGTACAGATTGCACAGGAAATTGTTCATAGAGAAAGTCATCCAAGCTTTAGAAATCTATCAAGAGAGATTAATCTTCTGATCTCAAGTTACTTTATTGTCTCATCTGAAGGAAATTTTGTGACATGTGCGGTTATAAAGATAATGTTCTTGGTTGGGATTCCCTAA 1566 0.4361 MVSSLPLSQPTTSHTFFSKTQLRGFGHGSRRPSFSFCRDSESKVRPIKASVDTAPFPLFQHPKVEESLSELEPADPDFYKIGYIRSMRAYGVEFKEGPDAFGVYASKDVEPLRRARVIMEIPLELMLTVSHKPPWMFFPDIIPVGHPIFDIINSTNPETDWHLRLACLLLYALDCQENFWQLYGDFLPSADECASLLLATEEELLELQDPNLASTIRYQQRHALEFWEKNWHNGVPLKIRRLARDPQRFMWAVGIAQSRCINLKMRLGALHQDANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMSGQKNDMFMQRYGFSSSVNPWDEIKFSGDARIHLDSFLSVFNISGLPEEYYHNTLLSNEGNTFVDGAVIAAARMLPTWSDGDVPPIPSVERKAVKELQNECQQMLAEFPTTSEQDQKLLDSLQDSTRTLEAAIKYVNFTYHLEVQIAQEIVHRESHPSFRNLSREINLLISSYFIVSSEGNFVTCAVIKIMFLVGIP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0045 521 Pfam Rubisco LSMT substrate-binding 413 456 IPR015353 -
Lele14g0045 521 CDD SET_LSMT 91 338 - -
Lele14g0045 521 Gene3D - 356 461 IPR036464 -
Lele14g0045 521 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 60 451 - -
Lele14g0045 521 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 335 459 IPR036464 -
Lele14g0045 521 ProSiteProfiles SET domain profile. 79 324 IPR001214 GO:0005515
Lele14g0045 521 Pfam SET domain 101 323 IPR001214 GO:0005515
Lele14g0045 521 SUPERFAMILY SET domain 101 338 IPR046341 -
Lele14g0045 521 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 84 338 - -
Lele14g0045 521 Gene3D set domain protein methyltransferase, domain 1 85 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0045 Lele-ChrLele14 686599 694681 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele14g0045 SET 1.4e-18 No_clan