Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0044 ATGGATCTTTCTTTGAGTGTTGGGAGTGGTAGCCATGGATCTGGGGATGAGCAAAACACTGCAAGCTCTCATCAGACAGTGGGAACAAAGAAGCATGCTCATCGTCACACTCCTATGCAGATCACGCGACTCGAAGAGTTTTTCAAGAACTGTCCACATCCTGATGATGAACAACGCAGGGATTTAGGCAGGGAGCTAGGGCTTGAGCCCAAACAAATAAAGTTCTGGTTTCAGAACAAGAGAACTCAAACCAAGACACTGAACGAACGGTTTGATAACAATGTTCTTCGTGCTGAGAACGAAAGAATTCAGTCTGAGAACACAGCAATCAAAGAGGTTCTCATGAGTGTAACATGCCCTGCTTGTGGTGGTCCCACCTATGGAGACCAACAACAAAGGCATACTTTGCAAAAGCTGGTTCAAGAAAATGCTTATCTCAAACAAGAGTATGAAAAGGCGACAAGGCTCTTAGCGGAGTTTGCTGGGAAACCTGATCTGTTGTTACAGAAGAATTTCCTAAGCATAGGAACTCCATCATCATCATCATTATCATCAGAACATGGCTTGTCCCTGTCCATGTCCATGCCCATGTCTGATGACAACACTAACATGTTGCCACCGGCAAACAAAAACAAGCAGGGAGTGATGTGGGAGACAGCCGTTAACGCTATGGAAGAACTAACGAGGCTCGTCCGTGTGGAGGAGCCACTGTGGGTCCGATCCGAAGCAGCCTGCGAGGCCGACGGAGCTTTCTTCTTCCTCCCAAATCGTGAAATCTATGAAAAGATATTCCCTAGGGCTCATCACCTCGGCAAGAAGCTCACCAATGCTCGTGTCGAATGTTCTAAAGCTTCTTGTGTCGTCAACTTGACTCCCTTCAAATTGGTTCCCATGTTTCTAGACTCTGACAAATGGGCTAATCTGTTACCAACAATTGTTGGAAAAGCAAGCACATTAAAAGTGCTTGAAGCTGGTGTGCCTGGGAGTAGGAATGGAGCCTTGCAACTGATGTATGAAGAACTTCACATGCTTACGCCTTTGGTGCCACCTCGTGAATTTGTGTTCCTTCGATACTGTTACCAAACGGACAAGACAACATGGGTGATAGCTGATGTGTCGTATGATTCCCCCGACGACATCGATTTTTCTTATAATGCCTCTTCCTGGAAGCTTCCTTCTGGTTGCATGATTCAAGAACTCTCCAATGGCTTCTCCAAGGTTACTTGGGTGCAACATGTGGAAGTGGAGCACCAAGCCCTAATAGTGCACATGCTATTCAGGAATCTTATGTTTAGTGGTGTTGCTTATGGAGCTCAACGATGGGCTGTGGCACTTGAGAGAATGTGTGAGAGAATTGGTTACACCATAAGCCGTCAGATTCCTATTGATGAAGCTACAGCTTCAGTGATGAGCATACCGGATGGAAGAAGAAGCCTGATGAAGCTAGGGCATCGAATGTTAAAGAGCTTCTGTACAGTGATAAGCATGAACAAGACTGGAAGGGAGCAAGAAGTTGCACAAATCAGCGAGGACAATGAGTTTGGTGTCAGAACTTTCGTTCGCAACAACCTCGAAACAGGTCAGCCTCAAGGTATGACTCTAACAGCCGCCGCCCCTCTCTGGCTCTCTATTTCTCCCCATCGTGTCTTTCACTTCCTCCGTGACGTCACTCGACGATTCCAGTGGGATATTCTTTGCCATGAAAATTCGGAGAGTGAAGTTGTACGCATCTCAACTGGAACTCATCCTGGAAACTACTTATCCGTTATTCAGACAAACAATAGTGAGAATGACAGCCTTGCCATTCTTCAAGAAGCTTGTGTAGAGCCGATGGGATGTGTGCTGGTGTACGCTCCGGTGGACAACAGGACGATGAATGCGGTCATGAGAGGAGAGGACTCGACCACCATGTCGATTCTGCCGTCCGGCCTTGTGGTCGTGAGGGACAACATGGGAAGATCCGAAGGCGGCAGCGGTGGGTCGATACTCACAATGACTTTACAAATTATGGTGAATAGCAGTGTGGACATGACGAACGTTAACATGGAGAACGTGACTACAGTGAAGAACCTCGTCAACAGTACCCTCAGCAAGATCAAGTTTGCTCTCATGAATAATTAG 2121 0.4682 MDLSLSVGSGSHGSGDEQNTASSHQTVGTKKHAHRHTPMQITRLEEFFKNCPHPDDEQRRDLGRELGLEPKQIKFWFQNKRTQTKTLNERFDNNVLRAENERIQSENTAIKEVLMSVTCPACGGPTYGDQQQRHTLQKLVQENAYLKQEYEKATRLLAEFAGKPDLLLQKNFLSIGTPSSSSLSSEHGLSLSMSMPMSDDNTNMLPPANKNKQGVMWETAVNAMEELTRLVRVEEPLWVRSEAACEADGAFFFLPNREIYEKIFPRAHHLGKKLTNARVECSKASCVVNLTPFKLVPMFLDSDKWANLLPTIVGKASTLKVLEAGVPGSRNGALQLMYEELHMLTPLVPPREFVFLRYCYQTDKTTWVIADVSYDSPDDIDFSYNASSWKLPSGCMIQELSNGFSKVTWVQHVEVEHQALIVHMLFRNLMFSGVAYGAQRWAVALERMCERIGYTISRQIPIDEATASVMSIPDGRRSLMKLGHRMLKSFCTVISMNKTGREQEVAQISEDNEFGVRTFVRNNLETGQPQGMTLTAAAPLWLSISPHRVFHFLRDVTRRFQWDILCHENSESEVVRISTGTHPGNYLSVIQTNNSENDSLAILQEACVEPMGCVLVYAPVDNRTMNAVMRGEDSTTMSILPSGLVVVRDNMGRSEGGSGGSILTMTLQIMVNSSVDMTNVNMENVTTVKNLVNSTLSKIKFALMNN 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0044 706 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 703 IPR042160 -
Lele14g0044 706 MobiDBLite consensus disorder prediction 1 35 - -
Lele14g0044 706 SMART START_1 218 451 IPR002913 GO:0008289
Lele14g0044 706 Gene3D - 268 440 IPR023393 -
Lele14g0044 706 Pfam START domain 220 451 IPR002913 GO:0008289
Lele14g0044 706 SUPERFAMILY Homeodomain-like 17 87 IPR009057 -
Lele14g0044 706 MobiDBLite consensus disorder prediction 1 27 - -
Lele14g0044 706 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Lele14g0044 706 SUPERFAMILY Bet v1-like 216 453 - -
Lele14g0044 706 CDD homeodomain 30 85 IPR001356 GO:0003677
Lele14g0044 706 ProSiteProfiles START domain profile. 209 454 IPR002913 GO:0008289
Lele14g0044 706 Coils Coil 88 108 - -
Lele14g0044 706 Gene3D - 8 86 - -
Lele14g0044 706 SUPERFAMILY Bet v1-like 531 694 - -
Lele14g0044 706 SMART HOX_1 29 91 IPR001356 GO:0003677
Lele14g0044 706 Coils Coil 136 156 - -
Lele14g0044 706 FunFam Homeobox-leucine zipper protein HDG1 15 103 - -
Lele14g0044 706 CDD START_ArGLABRA2_like 212 450 - -
Lele14g0044 706 Pfam Homeodomain 32 85 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0044 Lele-ChrLele14 649101 654896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0044 30 703 Homeobox Transcription Factor Family AT1G73360 40.762 2.19e-174 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele14g0044 START 2.1e-33 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0044 14 649101 654896 Lele15g2395 15 28231039 28237663 hybridization
Lele14g0044 14 649101 654896 Lele16g2353 16 23942904 23948704 hybridization